DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct2 and Svopl

DIOPT Version :10

Sequence 1:NP_651238.2 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001418754.1 Gene:Svopl / 500085 RGDID:1566053 Length:494 Species:Rattus norvegicus


Alignment Length:454 Identity:112/454 - (24%)
Similarity:185/454 - (40%) Gaps:96/454 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFT 183
            ||.|   .::..|...::...|.::.||:||.|:|:|||..||..|.:....|.:|...:|.|..
  Rat    78 EWQL---ENWQVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIW 139

  Fly   184 YTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFV---HDWRW 245
            :.|.|.|||...|| .....::..|.:....|.|......:|:..|.:|....|..|   ..|||
  Rat   140 FVFLRTMVGCGVSG-HAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTIGWRW 203

  Fly   246 LQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENS 310
            |....::||:|.:..:..||||||:.:..|....|:..::..|:.|:..:.:..|.|.:.|   .
  Rat   204 LIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEGRLVEPILE---K 265

  Fly   311 EEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLL- 374
            ..:....||.:.|                  |.||.|::.||..|..|||:...::.|....|: 
  Rat   266 RGRFADLLESKYL------------------RTTLQIWIIWLGISFAYYGVILASAELLERDLVC 312

  Fly   375 -----------------------------------NFVISGAVEIPAYIFLLLTLNRWGRR---S 401
                                               ..:||...||......:|.:|..|||   |
  Rat   313 GSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGINFLGRRLSLS 377

  Fly   402 ILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLG-----KLAITASYGTVYIFSAEQFPTVVRNV 461
            |..||..:..|.|          :....:..::|     :..:.|::.|:||::||.:||.:|.:
  Rat   378 ITMGCTALFFLLL----------NICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRAL 432

  Fly   462 ALGAASMVARISGMMAPFL-------NFLATIWKPLPLLICGSLTLVAGLLSLLLP-ETHNKPM 517
            .:|.:..:.||..|:|||:       :||..      |.:..|:.:|..:.:..|| ||..:.:
  Rat   433 GMGTSGSLCRIGAMVAPFISQVLMSASFLGA------LCLFSSVCVVCAISAFTLPIETKGRAL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_651238.2 2A0119 11..520 CDD:273328 112/454 (25%)
SvoplNP_001418754.1 MFS_SVOPL 49..482 CDD:341000 108/444 (24%)

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