DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and CG4462

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_650849.1 Gene:CG4462 / 42376 FlyBaseID:FBgn0038752 Length:573 Species:Drosophila melanogaster


Alignment Length:558 Identity:131/558 - (23%)
Similarity:226/558 - (40%) Gaps:107/558 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGDFGRYQKIIYFLICLTSIPVAFHKLAGVF----LLAKPDFRCALPFENGSSYDLPTHLWNLSY 70
            :||||.:|.....:|.|..||.|:.....:|    |....:|.|...:...||        |.|:
  Fly    47 VGDFGIWQLRTILIIFLCKIPAAWFMACIIFTGPELYPGSEFTCDTSYLTSSS--------NSSF 103

  Fly    71 PENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATSDS 135
            ..::...|.            :..|:..:..|..:.|..|  .:|.:.::||||.||...|.:..
  Fly   104 SISDNQCYV------------LDESTGTSSECEQFNYVSS--FDSLIMQFNLVCLRDIFVAWTQY 154

  Fly   136 LFMLGVLLGSIVFGQLSDKYGRKPILFAS--------LVIQVLFGVLAGVAPEYFTYTFARLMVG 192
            ..:.|||:|.::        |.|.:|..|        .|.|:|.||:.|.|.::..:...|.:..
  Fly   155 WHLFGVLVGGVM--------GTKMMLGISPRSTYCVGAVAQILCGVVTGYARDFSLHCAFRCLSA 211

  Fly   193 ATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIALTLPG-LI 256
            ...:.:|.....:..::.....|:.|.|....|:|:|.:|....:.|.:.|..:.:.:|.|. ::
  Fly   212 VCCAIMFTAGQAIFADITAGMHRIGAIILYDTFWSIGVILLPGLSSFFNSWSLIYVGITFPTIML 276

  Fly   257 FMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKA------- 314
            .:..|| .|:|.||||           ...|.||     |.:.:.::|.||....:::       
  Fly   277 ILLLYW-TPDSPRWLL-----------RHAADRF-----SIDNVEQILREGAAINDRSFKIPPDF 324

  Fly   315 KQKLE--DQELDEGPPPSVWDLFCYPNLRRKTLLI----FLDWLVTSGVYYGLSWNTSNLGGNVL 373
            :|:||  .:.|...|||:.|... :...|.||.::    .|.:.|.:  :.|:..|..:.|.:.|
  Fly   325 RQQLEQLSERLKAQPPPAPWTEL-WKGKRAKTHMVAAHLALAFFVIN--FMGMLLNIRSFGRDYL 386

  Fly   374 L-NFVISGAVE-IPAYIFLLLTL--NRW-----GRRSILCGCLVMAGL------SLLATVIIPQR 423
            : |.:..|..| |..::.|..||  |:|     |..:||.|.|...|.      |:.|.:.:   
  Fly   387 VPNTIAMGFSEIIGCFLALHFTLKHNKWKWQCAGVFNILAGILGCMGWIFTNADSMDADLKV--- 448

  Fly   424 MHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWK 488
              :|.:..|.:.|.|::.:...:.....|..|...:.:.:.:....||:..:.|||.|.|..|..
  Fly   449 --SLWMIIATIPKAAVSCAQSMILACMNELMPANKKQLFVFSVVTWARVWLLSAPFFNVLRKIDT 511

  Fly   489 PLPLL----------ICGSLTLVAGL-LSLLLPETHNK 515
            .:.|.          ||.||.|...| :|.::|....:
  Fly   512 AMSLTSYCVFSILGGICTSLLLTPRLSVSPVVPHLEQR 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 131/557 (24%)
MFS 127..503 CDD:119392 99/422 (23%)
CG4462NP_650849.1 2A0119 <126..532 CDD:273328 105/440 (24%)
MFS 149..>284 CDD:119392 31/143 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450235
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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