DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a6l

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_996960.2 Gene:slc22a6l / 404609 ZFINID:ZDB-GENE-040426-2249 Length:560 Species:Danio rerio


Alignment Length:546 Identity:161/546 - (29%)
Similarity:275/546 - (50%) Gaps:43/546 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFEN--GSSYDLPT 63
            |.:.:.:..:|..||:|.:...|:.:..:.:|.|.|...|:.|.|...|. |..|  .||.|...
Zfish     1 MAFSDLLEQVGSTGRFQVLHVTLLSMPILMMASHNLLQNFVAAVPPHHCQ-PHANLSMSSTDAMD 64

  Fly    64 HLWNLSYP-----ENERCSYY--------DVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLN 114
            .| ..:.|     :.|||..|        .::.:|...:.|:  :..||::| ..:.|:.::..:
Zfish    65 VL-RATVPLGLNGKLERCKRYTTPQWQILSLNTSESLWDESM--AETETQSCEDGWFYNMTEMSS 126

  Fly   115 SAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAP 179
            :.:|||:|||....:...|.:.:|.|||:|:||||.|||::||:.:|..|.::..:.|.....:.
Zfish   127 TIITEWDLVCDYRALKQMSQTTYMGGVLVGAIVFGGLSDRFGRRVLLLISNLMMAIGGTCVAFST 191

  Fly   180 EYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWR 244
            .:..:...|:..|...||:.|.::.:.:|.:....|...|......::.|.::.|..||.:.|||
Zfish   192 SFTMFCVFRVCCGMALSGLVLNSFSLIVEWIPTRVRTVVGTGTGYCYTTGQLILAAVAYCIRDWR 256

  Fly   245 WLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFN-------KVEISDEALSE 302
            ||.:|::||..:...|.|...||||||:|..:.:.|:.|::..||.|       |:::      |
Zfish   257 WLTLAVSLPFYVSFLYSWWFLESARWLVLTKKPEQAVKNLKTVARINGRSAEGDKIDL------E 315

  Fly   303 LLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSN 367
            :|.|....|....:          ...|..||.....:|..|:.:...|..||..|||||.:...
Zfish   316 MLQESMKKEMACSK----------GSYSALDLLRTSTMRTITICLSAVWFSTSFAYYGLSMDLQK 370

  Fly   368 LGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACA 432
            .|.::.|..:|.|||:|||.|.:.:.::..|||...||.||:||:.:|..:::|..:..|..:.|
Zfish   371 FGVSIYLIQIIFGAVDIPAKIIVTICMSMLGRRPSQCGALVLAGIMILINLLVPSDLQMLRTSLA 435

  Fly   433 MLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGS 497
            ::||..:.||:...|:::.|.:|||:|...:|..||:||...|:||.:..|...:..:|..|.|.
Zfish   436 VIGKGCLAASFNCCYLYAGELYPTVIRQSGMGWVSMMARFGAMVAPMVLLLGDDYPWIPGFIYGG 500

  Fly   498 LTLVAGLLSLLLPETHNKPMLETIAD 523
            ..:|:|:.:..||||.::|:.:||.|
Zfish   501 APIVSGIFAFFLPETLSQPLPDTIQD 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 157/531 (30%)
MFS 127..503 CDD:119392 116/382 (30%)
slc22a6lNP_996960.2 2A0119 11..523 CDD:273328 157/531 (30%)
MFS 116..513 CDD:119392 124/412 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588746
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.980

Return to query results.
Submit another query.