DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a4

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:536 Identity:182/536 - (33%)
Similarity:289/536 - (53%) Gaps:33/536 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFE-NGSSY----DLP 62
            ||:....||.:|.:|..::..:.::.:|..|..|..||:...|...|.:|.: |.||.    .:|
Zfish     4 YDDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPEQINISSVWRDAAIP 68

  Fly    63 THLWNLSYPENERCSYYDVD---------YTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLNSAV 117
            |.:.: ...:...||.|.:|         ||.   |..:..|..||:.| ..:.|.:..|.::.|
Zfish    69 TQMQD-GVLKRSSCSRYRLDTLRQLSMLNYTP---NVEVNLSQIETEPCVDGWSYSQEFYQSTIV 129

  Fly   118 TEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYF 182
            |||:|||.|::....:.|::..|||:|:.:.||:||:|||:|:||..:.:|.:..::...:|.:.
Zfish   130 TEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITILIQMFSPSWE 194

  Fly   183 TYTFARLMVGATTSGVFLVAYVVAMEMVGPDKR-LYAGIFVMMFFSVGFMLTAVFAYFVHDWRWL 246
            .::.....||.:....::||||:..|::.|..| |:..:.|.|...:|.|...:.|||:..||||
Zfish   195 VFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSLGVFMGSGIGQMFFPLAAYFIRSWRWL 259

  Fly   247 QIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSE 311
            .:...|.||::...:|.||||.||||.:||...|.|.:::||..|:|     ...|::......|
Zfish   260 VLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRV-----TAPEVIFSSSEIE 319

  Fly   312 EKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNF 376
            |.||::::..        |:.|:....|.....|:..|.|:|.:..||.|..||:||.||..|||
Zfish   320 EAAKKRIQKH--------SILDILSNCNAVSTILICSLLWMVITMSYYALILNTTNLHGNPYLNF 376

  Fly   377 VISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITA 441
            .:|..||:||||...|.|....||......|::.|..:....:||..:..|..|..|||||.:||
Zfish   377 FLSAVVEVPAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIPTELQGLATALEMLGKLCVTA 441

  Fly   442 SYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLS 506
            ::..||..::|.|||||||:|:|:.||.|||..:::||:.:|...::.:|.::.|.|.|.:|::|
Zfish   442 AFCVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIVIGGLALFSGVMS 506

  Fly   507 LLLPETHNKPMLETIA 522
            |||||:..|.:.||||
Zfish   507 LLLPESKGKVLPETIA 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 175/524 (33%)
MFS 127..503 CDD:119392 130/376 (35%)
slc22a4NP_957143.1 2A0119 12..520 CDD:273328 175/524 (33%)
MFS 144..510 CDD:119392 134/378 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588461
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.870

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