DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and F23F12.13

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:515 Identity:138/515 - (26%)
Similarity:239/515 - (46%) Gaps:80/515 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 FHKLA------GVFLLAKPDFRCALPFENGSSYDLPTHLWNLSYP-----ENERCSYYDVDYTEE 86
            ||.|.      .:|...:..|.....|..|.|.|.|:  :..|.|     ::|.|          
 Worm     9 FHWLCFFLWQFALFFCCQQIFSIFYNFSPGLSCDDPS--FQFSKPKCKLSKSEIC---------- 61

  Fly    87 YLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCG-RDFMAATSDSLFMLGVLLGSIVFGQ 150
                     |..|..||..|.:.:.: :|.|.::.:.|| :.:.||...::..:|||:|:|.:|.
 Worm    62 ---------SELTANCSKIVIEEAPF-HSMVQDFKMFCGTKAYDAAWVATIQFIGVLIGAITYGH 116

  Fly   151 LSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKR 215
            |.|.:||||:.|..:.:.:||||.:|.||.:..:...|.:||.:.:.:.:|.|...:|.:.|::|
 Worm   117 LGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAFRFIVGTSIASILIVFYAYILEFIEPEQR 181

  Fly   216 LYAGIFVMMFFSVGF-MLTAVFAYFVHD-WRWLQIALTLPGLIFMFYYWIIPESARWLLLKGR-K 277
                :|:..||:.|: .|....|.|:.. ||...||.:|..|..:....|:|||.:|...|.| :
 Worm   182 ----VFLRSFFNWGYARLVFTLACFICGYWRSAAIATSLLSLPILPVLLILPESPKWFNTKKRFR 242

  Fly   278 DCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRR 342
            |...|..:.|.......::||  .:.::..|..|||:.:..           ::.|||....:..
 Worm   243 DARAAEKRVAWLSGIPYVNDE--DQSIEISEKLEEKSTKIY-----------TMKDLFTSWTIAY 294

  Fly   343 KTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLLT---LNRWGRR---- 400
            :|:::...|..||...:|...|:.||.||..|:..:||||...|.||:.|.   :..:.||    
 Worm   295 RTIVVGSLWFSTSLSAFGSDLNSGNLAGNFYLSQFVSGAVTAFAKIFVFLLDTYVPSFDRRRLHQ 359

  Fly   401 -----SILCGCLVMAGLSLLATVIIPQ-------RMHTLIVACAMLGKLAITASYGTVYIFSAEQ 453
                 .|||.|::|      ..:|:|:       .....|:...::|...|..::...|:.:.|.
 Worm   360 YPQIAMILCYCVIM------VLMILPESDCGSQGSRDLAIIIINIIGVSFIEITWDACYLVAVEC 418

  Fly   454 FPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLS-LLLPET 512
            |||.:|.:.:|..|::||...::||.:.:|:.|::|.|..:..|:..::.|:| :.||:|
 Worm   419 FPTKIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYAVVCSIGTISLLISCVFLPDT 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 138/515 (27%)
MFS 127..503 CDD:119392 110/397 (28%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 116/425 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163007
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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