DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and CG4324

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001286807.1 Gene:CG4324 / 37830 FlyBaseID:FBgn0034956 Length:478 Species:Drosophila melanogaster


Alignment Length:439 Identity:109/439 - (24%)
Similarity:185/439 - (42%) Gaps:92/439 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAP 179
            |...|||:.   .|..|:..::..||::|.|..:.|||::||||..|....|:.||:.:|:.|||
  Fly    82 SLFCEWNVT---KFQQASVTTVVFLGMMLSSSFWTQLSNRYGRKSALTLFGVLLVLYSILSSVAP 143

  Fly   180 EYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIF---------VMM--FFSVGFMLT 233
            .|......|.:||            .|:..|.....|||...         |:|  |:::|....
  Fly   144 SYAWLLTLRGLVG------------FAIGCVPQSVTLYAEFLPTKHKGKCVVLMDCFWALGACFE 196

  Fly   234 AVFA---YFVHDWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEI 295
            .|.|   |..:.||.|......|.|||......:.||||:....|..|.||..:::.|..||..:
  Fly   197 VVLALVVYPYYGWRGLLALSATPLLIFTILSPWLSESARYYSYNGHNDKAIKVLEQIAHNNKRHM 261

  Fly   296 SDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYG 360
               .:..|:.:.|.|..::.:.|                 ..|:|.|.|:|::..||.::..|||
  Fly   262 ---LMGRLMADDEPSCAESFRSL-----------------LSPSLYRTTILLWFLWLASAFCYYG 306

  Fly   361 LSWNTSNL--------GGNVLLNFVISGAV--------EIPAYIFLLLTLNRWGRRS-------- 401
            |...|:.|        ..|..:.|:.|..:        |.|..:..:..:..:|::.        
  Fly   307 LVLVTTELLVARNKESHPNECVTFMTSDFMDLLWITLSEFPGILLTIKVVKLFGKKKTIVLQYLA 371

  Fly   402 -ILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGA 465
             :||..::|:..|..:|.:      ||.:|     :..|:..:..:|:::.|.:|..:|:|.:..
  Fly   372 LVLCTLVLMSVESRFSTSV------TLFIA-----RGTISGIFQAIYVYTPEIYPAALRSVGVSG 425

  Fly   466 ASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLS----LLLP 510
            .|::||:..|:.|   |:|.:......:...|...:.|||:    :.||
  Fly   426 CSVLARLGAMLTP---FVAQVLMDSSRIQAMSTYAIVGLLASIACVFLP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 109/439 (25%)
MFS 127..503 CDD:119392 100/414 (24%)
CG4324NP_001286807.1 2A0119 10..476 CDD:273328 109/439 (25%)
MFS 60..471 CDD:119392 107/437 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458122
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
43.970

Return to query results.
Submit another query.