DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Slc22a5

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_035526.1 Gene:Slc22a5 / 20520 MGIID:1329012 Length:557 Species:Mus musculus


Alignment Length:548 Identity:182/548 - (33%)
Similarity:299/548 - (54%) Gaps:59/548 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWN 67
            |||....||::|.:|::|:||:..:.||..|:.::.|||...|:.||.:|    .:.:|.:...|
Mouse     4 YDEVTAFLGEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVP----HTVNLSSAWRN 64

  Fly    68 LSYPEN--------ERCSYY-----------------DVDYTEEYLNGSIPRSSNETKTC-SSYV 106
            .|.|..        ::|..|                 |||.  |.|         |.::| ..:.
Mouse    65 HSIPLETKDGRQVPQKCRRYRLATIANFSELGLEPGRDVDL--EQL---------EQESCLDGWE 118

  Fly   107 YDRSKYLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLF 171
            ||:..:|::.||||:|||..|:.|..:.|||.:|||:||.:.|||||::|||.:||.::.:|..|
Mouse   119 YDKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDRFGRKNVLFLTMGMQTGF 183

  Fly   172 GVLAGVAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKR-LYAGIFVMMFFSVGFMLTAV 235
            ..|...:..:..:|...::||......::.|:|:..|::....| ::|.:.|.:|::.|||:..:
Mouse   184 SFLQVFSVNFEMFTVLFVLVGMGQISNYVAAFVLGTEILSKSIRIIFATLGVCIFYAFGFMVLPL 248

  Fly   236 FAYFVHDWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEAL 300
            ||||:.|||.|.:|||:||::....:|.||||.|||:.:||...|...::|||:.|.:    .|.
Mouse   249 FAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRIKEAEVIIRKAAKINGI----VAP 309

  Fly   301 SELLDEGENSEEKAKQKLEDQELDEGPPP--SVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSW 363
            |.:.|..|.           |:|:...|.  .::||....|:|..|::..:.||..|..|:|||.
Mouse   310 STIFDPSEL-----------QDLNSTKPQLHHIYDLIRTRNIRVITIMSIILWLTISVGYFGLSL 363

  Fly   364 NTSNLGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLI 428
            :|.||.|::.:|..:..|||:|||:...|.|....||..:...|.:.|..||...::|..:..|.
Mouse   364 DTPNLHGDIYVNCFLLAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGSVLLFMQLVPSELFYLS 428

  Fly   429 VACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLL 493
            .|..|:||..||::|..||:::||.:||||||:.:|.:|..:|:..:::|:..:|....:.||.:
Mouse   429 TALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYI 493

  Fly   494 ICGSLTLVAGLLSLLLPETHNKPMLETI 521
            :.||||::..:|:|..||:...|:.:||
Mouse   494 LMGSLTILTAILTLFFPESFGVPLPDTI 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 176/537 (33%)
MFS 127..503 CDD:119392 132/378 (35%)
Slc22a5NP_035526.1 2A0119 12..520 CDD:273328 176/537 (33%)
MFS 123..510 CDD:119392 142/401 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843605
Domainoid 1 1.000 282 1.000 Domainoid score I1643
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 349 1.000 Inparanoid score I2273
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm11112
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.820

Return to query results.
Submit another query.