DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct2 and Y66D12A.13

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_499489.1 Gene:Y66D12A.13 / 190497 WormBaseID:WBGene00013439 Length:533 Species:Caenorhabditis elegans


Alignment Length:590 Identity:137/590 - (23%)
Similarity:253/590 - (42%) Gaps:125/590 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RYQKI--IYFLICLTSIPVAFHKLAGVFLLAKPDFR---CALPFENGSSYDLPTHLWNLSYPENE 74
            |.||:  |:.|.....:.:||::.....:|:...|.   .|.|...|.. |:   ::|.:.| .:
 Worm     2 RIQKVDDIFELDAYQLVVLAFNEFLIFTMLSNVVFNMFGAAAPRLPGCD-DI---IYNATSP-FQ 61

  Fly    75 RCSYYDVDYTEEYLNGSIPRSSNETKT--------CSSYVYDRSKYLNSAVTEWNLVCGRDFMAA 131
            :|..||.     :|:...|....|.|:        ||.  ::...|::| :|:...|..|...:.
 Worm    62 QCEQYDA-----HLDCEEPAMEYEFKSVAVEFQELCSR--HNEHSYMDS-ITQLFGVNNRVRFST 118

  Fly   132 TSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTS 196
            ||.   |:|::|||.:.|||||.||||.|....|.:.:.|...:..:.....:...|..:|....
 Worm   119 TSQ---MIGIMLGSAIAGQLSDLYGRKKITLLFLCMMLFFSTSSSFSSSIEVFIIVRFFIGICCG 180

  Fly   197 GVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQ---IALTLPGLIFM 258
            |:..|..::.:|.:....||:....|.  ::..:||.|:|||...:||.|.   .|:|:..::..
 Worm   181 GLTTVGSILVVENLPSAHRLWMSTVVT--WAPNYMLFALFAYITGEWRCLARMCNAMTVIAILIC 243

  Fly   259 FYYWIIPESARWLLLKGRKDCAIANMQKAARFNKV--EISDEALSELLDEGENSEEKAKQKLEDQ 321
            .:  ::|||.::|:...:...|:.:::...:|.:|  :::|..:.:::......:.|::.|.:..
 Worm   244 AF--LLPESPKYLIQARKGKLAVKSIKYINKFKRVRNQLTDTEIEDVVHSAIEVDTKSRAKAKKY 306

  Fly   322 ELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPA 386
                    |...|:.:|.:..:|::..:.....|.|.|||.:|...|.|::.:|..:||.:.   
 Worm   307 --------SFIHLYIHPKITVQTVVASISMFSVSYVTYGLLFNYDVLTGSIYMNAAVSGFLR--- 360

  Fly   387 YIF--LLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVA---CAMLGKL--------- 437
            |:.  ::..|:.:|...:        |         .:|||.:.|:   |.|.|..         
 Worm   361 YVVGAVVAVLDHFGGEHV--------G---------RKRMHFITVSFIMCCMFGIFFIYFNDLVL 408

  Fly   438 -------AIT-ASYGT-------VYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIW 487
                   |:| .::||       :.:.:||.|||.:||:|....::..|:..:..|    :...:
 Worm   409 EYKSWIRALTLLAFGTTGCLFLQLLLITAEMFPTGIRNIASAHINVCGRLGNVFGP----MVFSY 469

  Fly   488 KPLPLLICGSLTLVAGLLSLL--------LPETHNKPMLETIADGERFGKKTKADVYLETGQELR 544
            |   |...||..|:.|::.||        :|||.|:|    :..|....||.:.|          
 Worm   470 K---LGFAGSGYLILGVICLLDVIVFHIFIPETKNQP----LPQGMPSRKKQRKD---------- 517

  Fly   545 APEAQ 549
             ||.|
 Worm   518 -PEVQ 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 130/559 (23%)
MFS 127..503 CDD:119392 93/409 (23%)
Y66D12A.13NP_499489.1 2A0119 36..506 CDD:273328 122/528 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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