DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and F32H5.4

DIOPT Version :10

Sequence 1:NP_651238.2 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001370023.1 Gene:F32H5.4 / 185216 WormBaseID:WBGene00009350 Length:528 Species:Caenorhabditis elegans


Alignment Length:494 Identity:130/494 - (26%)
Similarity:223/494 - (45%) Gaps:72/494 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SYPENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATS 133
            :||:...|...|| :.::....|....:....|.:| .||    ..|...::...||......||
 Worm    64 AYPKLVSCEGPDV-FIKDICKSSFDFHNPPNCTITS-KYD----FYSINVDYGHFCGEGAWVKTS 122

  Fly   134 DSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGV 198
            .|:.|:|||:||:..|.::|:|||..:|.....:.....:|...|.:...:|..|.::.....|:
 Worm   123 ISVQMVGVLIGSVTSGAVADRYGRLKVLSVCFFMVSSLSILNTFAKDLIYFTIIRTILSIFKGGL 187

  Fly   199 FLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDW---RWLQIALTLPG-LIFMF 259
            .....|..||.|....|.:  |..|:.::..:|:.:..||..|||   ::...||::|| ::|:|
 Worm   188 LSTYGVYKMEHVPRQHRFW--IATMISWAPNYMILSFVAYLCHDWITYQYAIFALSMPGAVVFLF 250

  Fly   260 YYWIIPESARWLLLKGRKDCAIANMQKAARFNK--VEI----SDEALSE----LLDEGENSEEKA 314
                :.||.|||:..||       :::|.:..|  :|:    ||.:.:|    |..|.:..||:.
 Worm   251 ----VKESPRWLIQAGR-------IEEARQVLKHIMEVDGNTSDHSWNEIEEMLQTEKKRQEERI 304

  Fly   315 KQKLEDQELDEGPPPSVWD---LFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNF 376
            |::..            :|   ||....:...|::::|....||...||..:|...|.|::.:|.
 Worm   305 KKRKN------------YDFRHLFWNKYMASVTMILWLGMFSTSFTNYGFVFNIEKLSGSLYINA 357

  Fly   377 VISGAVEIPAYIFLLLT---LNRWGRRSI-------LCGCLVMAGLSLLATVIIP-QRMHTLIVA 430
            ::.|::.....||..|.   ..:.||:.|       :..|:    .|:..|.... :..::||:.
 Worm   358 LLMGSLRWVLNIFFGLADLKFAKLGRKHIHLISKLTITICV----FSIFVTYYFEYEEDYSLIIR 418

  Fly   431 CAMLGKLAITASYGTVYIFSA----EQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLP 491
            .|.|  || :|:...|:|..:    |.:|||:||.|:...|..:||..::.|.| |:...:|.||
 Worm   419 VATL--LA-SATASQVFITKSMVLMEFYPTVIRNSAVSFKSSASRIGTILGPQL-FILCPYKSLP 479

  Fly   492 LLICGSLTLVAGL-LSLLLPETHNKPMLETIADGERFGK 529
            ..|.....|...: ..|.||||..||:.||:.:..:.|:
 Worm   480 YAILTGFCLFDAIAFQLRLPETKGKPLPETMPERHKNGR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_651238.2 2A0119 11..520 CDD:273328 127/483 (26%)
F32H5.4NP_001370023.1 2A0119 <104..509 CDD:273328 117/437 (27%)

Return to query results.
Submit another query.