DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Slc22a6

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_032792.2 Gene:Slc22a6 / 18399 MGIID:892001 Length:545 Species:Mus musculus


Alignment Length:574 Identity:174/574 - (30%)
Similarity:281/574 - (48%) Gaps:45/574 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHL 65
            |.:::.:..:|..||:|.|...::....:.:|.|.....|..|.|...|..|.....|.|.....
Mouse     1 MAFNDLLKQVGGVGRFQLIQVTMVVAPLLLMASHNTLQNFTAAIPAHHCRPPANANLSKDGGLEA 65

  Fly    66 W----NLSYPENERCSYYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLNSAVTEWNLVCG 125
            |    ....||:  |..:...:     ||:....:..|:.| ..:|||.|.:.::.||||||||.
Mouse    66 WLPLDKQGRPES--CLRFPFPH-----NGTEANGTGVTEPCLDGWVYDNSTFPSTIVTEWNLVCS 123

  Fly   126 RDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLM 190
            .......:.||||:|||||:::||.|:|:.||:.:|..:.:...:.|..|..||.|..|...||:
Mouse   124 HRAFRQLAQSLFMVGVLLGAMMFGYLADRLGRRKVLILNYLQTAVSGTCAAYAPNYTVYCIFRLL 188

  Fly   191 VGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIALTLPGL 255
            .|.:.:.:.:....:.||.:....|.|.|..:...:|:|..|.|..||.|..||.||:|:::|..
Mouse   189 SGMSLASIAINCMTLNMEWMPIHTRAYVGTLIGYVYSLGQFLLAGIAYAVPHWRHLQLAVSVPFF 253

  Fly   256 IFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLE- 319
            :...|.|...|||||....||.|..:..:|:.||.|                ...||.||..:| 
Mouse   254 VAFIYSWFFIESARWYSSSGRLDLTLRALQRVARIN----------------GKQEEGAKLSIEV 302

  Fly   320 -------DQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFV 377
                   :..|::| ..|..:|...|.|||..|.:.:.|..||..||||..:....|.::.|..|
Mouse   303 LQTSLQKELTLNKG-QASAMELLRCPTLRRLFLCLSMLWFATSFAYYGLVMDLQGFGVSMYLIQV 366

  Fly   378 ISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLI-VACAMLGKLAITA 441
            |.|||::||.....|.:|..|||......|::||:.:|...||| |.||:| .:.|:|||..:.:
Mouse   367 IFGAVDLPAKFVCFLVINSMGRRPAQLASLLLAGICILVNGIIP-RGHTIIRTSLAVLGKGCLAS 430

  Fly   442 SYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLS 506
            |:..:::::.|.:||::|...||..|.:||:..:::|.::..|..:..:||.|.|::.:.|..::
Mouse   431 SFNCIFLYTGELYPTMIRQTGLGMGSTMARVGSIVSPLISMTAEFYPSIPLFIFGAVPVAASAVT 495

  Fly   507 LLLPETHNKPMLETIADGERFGKKTKADVYLETGQELRAPEAQPLK-GSGETNG 559
            .|||||..:|:.:|:.|.:...:..:....||..:::     .||: .:.|.||
Mouse   496 ALLPETLGQPLPDTVQDLKSRSRGKQKQQQLEQQKQM-----IPLQVSTQEKNG 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 164/522 (31%)
MFS 127..503 CDD:119392 123/384 (32%)
Slc22a6NP_032792.2 2A0119 11..509 CDD:273328 164/522 (31%)
MFS 129..499 CDD:119392 125/387 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..545 7/35 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843672
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.980

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