DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct2 and C44C10.3

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_509958.2 Gene:C44C10.3 / 183452 WormBaseID:WBGene00008084 Length:474 Species:Caenorhabditis elegans


Alignment Length:542 Identity:128/542 - (23%)
Similarity:227/542 - (41%) Gaps:119/542 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHL 65
            |.||....||..|..:|        |.:..|..: :..:|.:..|.::|.    :|         
 Worm     1 MFYDVNRFHLCVFVTWQ--------LVNFAVGQY-IFNIFSIHVPKWKCG----DG--------- 43

  Fly    66 WNLSYPENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMA 130
                 |..:.|..|.          |.|:.:      .::|   .....|...:::.|||   .:
 Worm    44 -----PVTKDCKVYQ----------SCPKDN------LTFV---DPIFTSVAMDFDWVCG---SS 81

  Fly   131 ATSDSLF----MLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMV 191
            |...|.|    .||||:|:::||.||||||||||....:||.::..:..|::|.......||...
 Worm    82 AHYQSFFSLVQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARFCS 146

  Fly   192 GATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGF--MLTAVFAYFVHDWR---WLQIALT 251
            |.:.:||.:......:|.:...:|:    .:..||:.|:  :...|..|...:||   ::..|..
 Worm   147 GLSIAGVLVCICAWILESILSHQRM----VIRAFFNWGWTRVFITVVCYLTQEWRLASYVCAACL 207

  Fly   252 LPGLIFMFYYWIIPESARWLLLKGRKDCAIAN---MQKAARFNKVEISDEAL-SELLDEGENSEE 312
            :|.|:.:.:  :|||||.||..||.....|.:   |.|.|..:.|.|..:.: |:.|.|..|:: 
 Worm   208 VPALLMLIF--LIPESAIWLHSKGETAKMIESEKFMAKIAGVSYVPIEHKLIHSKTLLETLNTK- 269

  Fly   313 KAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFV 377
                                      .|.:|..::::.|...:...:....|:::|.||:.||..
 Worm   270 --------------------------GLFKKLFVLWIMWFFVAVCGFANDLNSNSLAGNLYLNQA 308

  Fly   378 ISGAVEIPAYIFLLL-----------TLNRWGRRSILCGCLVMAGLSLLATVIIPQRMH-TLIVA 430
            :.|.:.:.:.|.||.           ||::..:..::...|::|       :.:....| |..:.
 Worm   309 LFGILLVLSKIVLLFVDTKFENFKRRTLHQGSQSGMIISFLILA-------IFLWIDYHGTGFLI 366

  Fly   431 CAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKP---LPL 492
            ..:.|.:.|..::..||:.:.|...|..|..|:|:.|::|||..::||||.:..|.|.|   ..:
 Worm   367 VYLFGTMFIEYTWDAVYLCAIESMETSSRASAVGSCSLMARIGSLLAPFLTYANTWWPPAVYFTI 431

  Fly   493 LICGSLTLVAGLLSLLLPETHN 514
            ::.|::.|:...  :.|.||.|
 Worm   432 IVLGTVNLIISF--MFLQETKN 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 123/532 (23%)
MFS 127..503 CDD:119392 101/403 (25%)
C44C10.3NP_509958.2 2A0119 <64..456 CDD:273328 109/433 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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