DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Y51A2D.18

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_507620.2 Gene:Y51A2D.18 / 180202 WormBaseID:WBGene00013083 Length:550 Species:Caenorhabditis elegans


Alignment Length:511 Identity:131/511 - (25%)
Similarity:225/511 - (44%) Gaps:82/511 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GSIPRSSNETKTCSSYVYD---------------------RSKY-LNSAVTEWNLVCGRDFMAAT 132
            |:.||    ..:|.:.|:|                     ..:| ..|...|:|..|....:...
 Worm    70 GAAPR----VISCDNIVFDSLLEGKEICFELDKMGNCSHPEFQYQFRSINVEYNYFCNTSKLVKN 130

  Fly   133 SDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAG-----VAPEYFTYTFARLMVG 192
            |.|:.|.|||.|||||||:||.:|||   ..|.|..:  |:|.|     .:.....:|.:|.:||
 Worm   131 SISVQMFGVLTGSIVFGQISDSFGRK---IGSQVASL--GMLIGWLIVVQSRNLLHFTISRTIVG 190

  Fly   193 ATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWR---WLQIALTLPG 254
            ..|.|...:..|..||.:....|::  |.:.:.:|....:.:.||:...||:   ::...:.:||
 Worm   191 FFTGGSISIINVFIMENIPKKHRMW--INMAITWSPNMPIYSYFAWLASDWKSLAYINAFMCIPG 253

  Fly   255 LIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEG--ENSE-EKAKQ 316
            :  :|:.:.|.||.|||:.:|:...|:..:|:..:.:..|       .|:.|.  ||.. |.||.
 Worm   254 I--LFFQFFIHESPRWLVTRGKISEAVQVLQRQLKTSNQE-------NLIHEDFEENLRMEYAKT 309

  Fly   317 KLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGA 381
            :.::....:.   |.:.||..|.|...|:::...:..||.:.||:.:|...|.|::..|.|.:|.
 Worm   310 QAQNTRKTKF---SYYHLFVTPKLAITTIVLAYSYCATSIINYGVLFNMEKLSGSIYWNSVYTGL 371

  Fly   382 VEIP---AYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMH-----------TLIVACA 432
            :...   ::.:..|.....||:.|....||:..|| |:.|:....:|           ::::|.:
 Worm   372 MRYACNLSFGYADLKFKSIGRKFIHTSGLVIIVLS-LSLVVGSYALHLNHEMKDVIRISILLASS 435

  Fly   433 MLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGS 497
            |..::.|...     |.|||.|||.:|.:......:..|:..:::||:.:||..|..||......
 Worm   436 MTSQIYIADG-----IVSAELFPTPIRTIGYAFLQLWNRVGVVLSPFIFYLADYWLALPFCFMIL 495

  Fly   498 LTLVAGL-LSLLLPETHNKPMLETIADGERF----GKKTKADVYLETGQELRAPEA 548
            .:|:... ...|||||..:.::|.:....::    ||:...:|. |...||...||
 Worm   496 FSLIDTFSFECLLPETKGRHLVEHMPPRHQWWFGAGKEEIVEVE-EPDTELAKIEA 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 122/477 (26%)
MFS 127..503 CDD:119392 106/400 (27%)
Y51A2D.18NP_507620.2 2A0119 24..519 CDD:273328 122/477 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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