DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and K11D9.3

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_499382.1 Gene:K11D9.3 / 176510 WormBaseID:WBGene00010772 Length:480 Species:Caenorhabditis elegans


Alignment Length:546 Identity:137/546 - (25%)
Similarity:226/546 - (41%) Gaps:141/546 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DFGRYQKIIYFLICLT---SIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWNLSYPEN 73
            |..|:    :.|:.||   ||..|..::..:|....|.:.|.    ||.    ||          
 Worm     4 DINRF----HLLVLLTWQFSIFFASQQIFPIFSNYVPQWTCG----NGE----PT---------- 46

  Fly    74 ERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATSDSLF- 137
            ..||.|:                    :|.|.:...:....||..|::.:||:   :|...||| 
 Worm    47 SDCSVYE--------------------SCKSNLTFVNVAFKSAAMEYDWICGK---SAYLKSLFS 88

  Fly   138 ---MLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVF 199
               ..|||.|:..||.:||..||||:...:|.:.:|...:.|:||.|......|..:|.:..|..
 Worm    89 QIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGGTL 153

  Fly   200 LVAYVVAMEMVGPDKRLYAGIFVMMFFSVG---FMLTAVFAYFVHDWRWLQIA---LTLPGLIFM 258
            :|.....|||:.|.:|:    .:..||:.|   .|:|.: |..:.:||...||   ..||.||.:
 Worm   154 VVVCTFVMEMLLPQQRM----ALRAFFNWGVARLMMTLI-AMALPEWRMSSIACAVAALPALIII 213

  Fly   259 FYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEK-AKQ------ 316
            .:  :.|||..||..|||                           |||.:.||:. ||.      
 Worm   214 VF--VFPESPTWLHNKGR---------------------------LDEMKKSEKHIAKMAGVPYV 249

  Fly   317 KLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLN---FVI 378
            .:|.:.::..  .:|.::.....|..:..:::..|.|.|...|....|::.:.|::.:|   |.|
 Worm   250 PIEHKRIEHS--KTVMEMLQTKGLMSRLFVLWSMWFVASICGYATDLNSNTISGDLFVNQILFSI 312

  Fly   379 SGAV----------EIPAYIFLLLTLNRWGRRSILCGCLVMA------GLSLLATVIIPQRMHTL 427
            ..||          .:|:  |...||:: |.:.::|.|.::.      |.:.||.:|:       
 Worm   313 LIAVSKMILVVFDTHVPS--FRRRTLHQ-GAQLVVCICFLILTFMTFNGYTGLAFLIV------- 367

  Fly   428 IVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKP--- 489
                .::|.:.|..::...|:.:.|...|..|..|.|..|:||||..::||.||: |.:|.|   
 Worm   368 ----NLIGTVFIEYTWDACYLCAVESMETACRASATGTCSLVARIGAILAPMLNY-ANLWWPPSV 427

  Fly   490 -LPLLICGSLTLVAGLLSLLLPETHN 514
             |.:::.|::.|:.....|:  ||.|
 Worm   428 YLTVVLLGTINLIISYFFLV--ETKN 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 137/546 (25%)
MFS 127..503 CDD:119392 108/415 (26%)
K11D9.3NP_499382.1 2A0119 <66..454 CDD:273328 117/442 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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