DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Y82E9BR.16

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001022960.1 Gene:Y82E9BR.16 / 175300 WormBaseID:WBGene00022348 Length:575 Species:Caenorhabditis elegans


Alignment Length:614 Identity:189/614 - (30%)
Similarity:299/614 - (48%) Gaps:100/614 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAII-HLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLP-- 62
            |.:|:.:. :||:.|:||||.:||:||.:|.|:.|.|:..|......:||.||      .|||  
 Worm     1 MKFDDFLFTYLGEMGKYQKIQFFLVCLPTIVVSMHALSWTFASVDTPYRCRLP------SDLPEK 59

  Fly    63 ----THLWNLSYPENER------CSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAV 117
                |.|.|.:...|:.      ..|.....|..|...::|    :.:||..:::|.||...:||
 Worm    60 EPYYTTLLNFTKCTNDADANVPISEYGKPGVTCHYDRCTLP----DNETCHEHIFDHSKVEYTAV 120

  Fly   118 TEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYF 182
            ..|.:.|.|.::.||..:.:.:|.:.||..||.|.|:.|||.:.|.::|||:....|..:||.::
 Worm   121 QRWEITCDRSWIKATIQAAYYVGQMAGSTTFGMLGDRIGRKKVFFLAIVIQITCAYLIAIAPYWW 185

  Fly   183 TYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQ 247
            .|..||...|.:..|:|::|.|:.||:|||..|..|.:...:||::|.:...:.|.:..:::.|.
 Worm   186 LYALARAGTGFSHPGIFVIAVVIGMELVGPKYRKLASVITGLFFALGQIFLGIEAIYFTNYQILH 250

  Fly   248 IALTLPGLIFMFY-----------------------------YWIIPESARWLLLKGRKDCAIAN 283
            :.:..|.|:|:.|                             .|::|||||||:.:.|...|...
 Worm   251 VVIASPALLFLSYCQKSAKNRKKIDFANFLADFLLKNRFFFSRWLVPESARWLVSQKRYKEADEV 315

  Fly   284 MQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSV-------WDLFCYPNLR 341
            :||||..|               |....|...::|:|.....|..|..       .|||..|.||
 Worm   316 LQKAASVN---------------GTVLPENWWEQLDDSTTGGGGAPGAPTKKLTGADLFRTPELR 365

  Fly   342 RKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGC 406
            ::||::|..|.|.|.||||::...:.|||::.:||:.:..|||||...:.|.::|.|||.||.|.
 Worm   366 KRTLVVFFLWPVISMVYYGMAMKANVLGGDIYVNFIFAAFVEIPALFIVYLLIDRIGRRLILAGG 430

  Fly   407 LVMAGLSLLATVIIPQRMHTLIVACAM-LGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVA 470
            |.:||..||...::...:...:....| ..|.:||..|..:|.:|.|.||||:||.|:|..|.:|
 Worm   431 LFIAGACLLVNWLMGDNVQLWMAITQMAFTKGSITGVYAAIYTYSPELFPTVIRNTAMGFCSTIA 495

  Fly   471 RISGMMAPFLNFLATIW------KPLPLLICGSLTLVAGLLSLL-LPETHNKPMLETIADGERFG 528
            |:..:.|.::    ::|      |...::..|.:.::|.:::|| ||||..||:.|:|.:     
 Worm   496 RVGAIAASYI----SMWIAEQFGKVFMIIPFGCMAVLAAVMTLLFLPETMGKPLPESIEE----- 551

  Fly   529 KKTKADVYLETGQELRAP-EAQPLKGSGE 556
                    :|.|...|:. |.|||..|.|
 Worm   552 --------IEEGDSYRSSHEMQPLSKSTE 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 175/564 (31%)
MFS 127..503 CDD:119392 126/418 (30%)
Y82E9BR.16NP_001022960.1 MFS_SLC22 107..537 CDD:340875 137/448 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I7320
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80237
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.960

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