DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct2 and B0252.3

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:435 Identity:118/435 - (27%)
Similarity:227/435 - (52%) Gaps:37/435 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TKTCSSYVYDRSKYLNSA----VTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKP 159
            |..|.|:|...|:  ||:    ..|::|.....::|.::.:.:|:|.::|.:....|:|.|||.|
 Worm    60 TGLCPSFVVKASE--NSSFIGVADEFDLTGDASWLAESTTTFYMVGNMIGGMFIPPLADHYGRLP 122

  Fly   160 ILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMM 224
            :..|::::..:.|:::..:.....:...|::.|...:...|..:|:..|......|.:..::..:
 Worm   123 VFVATVLLMAVGGMISAFSTSIMMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTSVYFGV 187

  Fly   225 FFSVGFMLTAVFAYFVHDWRWLQIALTLPGL-IFMFYYWIIPESARWLLLKGRKDCAIANMQKAA 288
            .:.||.....:.||.:.|||:|...:::|.: :.:..|..:|||..:|         :::.|.  
 Worm   188 MWVVGACFLGLLAYILPDWRYLMFCISVPNIFVALLIYMTVPESLHFL---------VSSQQN-- 241

  Fly   289 RFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFL---- 349
              .|:|...|.:     .|...:..|...:||:: :.|   |.:...|....:.|..::::    
 Worm   242 --EKIEAWLEKI-----RGPKGDISASDIVEDRD-ENG---SSFKTLCREMWKHKMFIVYVLVMT 295

  Fly   350 -DWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLS 413
             .|:|.:.:|:||::.::||.||:.||||:...||.|||||..:.:|::||:.::.|..::||||
 Worm   296 YIWIVDTFIYFGLAFYSTNLAGNLYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLS 360

  Fly   414 LLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAP 478
            .|..|:..:..|   :...:|||.||:.|:.::|:|::|.|||..||..:|....::|..||::|
 Worm   361 FLGIVLSSEAWH---IHFWLLGKFAISCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSP 422

  Fly   479 FLNFLATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIAD 523
            :|:.|..:....|.:....:.:..|||:|:||||.|..:..|||:
 Worm   423 YLSHLTAVHALAPAITLSLIAVSGGLLTLILPETLNTKLPSTIAE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 115/430 (27%)
MFS 127..503 CDD:119392 97/381 (25%)
B0252.3NP_001021888.1 MFS 87..454 CDD:119392 101/391 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162984
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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