DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and B0252.3

DIOPT Version :10

Sequence 1:NP_651238.2 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001021888.1 Gene:B0252.3 / 174130 WormBaseID:WBGene00015088 Length:484 Species:Caenorhabditis elegans


Alignment Length:435 Identity:118/435 - (27%)
Similarity:227/435 - (52%) Gaps:37/435 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TKTCSSYVYDRSKYLNSA----VTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKP 159
            |..|.|:|...|:  ||:    ..|::|.....::|.::.:.:|:|.::|.:....|:|.|||.|
 Worm    60 TGLCPSFVVKASE--NSSFIGVADEFDLTGDASWLAESTTTFYMVGNMIGGMFIPPLADHYGRLP 122

  Fly   160 ILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMM 224
            :..|::::..:.|:::..:.....:...|::.|...:...|..:|:..|......|.:..::..:
 Worm   123 VFVATVLLMAVGGMISAFSTSIMMFCIMRMIHGIFYTAAGLAGWVLGYENTPLRLRFFTSVYFGV 187

  Fly   225 FFSVGFMLTAVFAYFVHDWRWLQIALTLPGL-IFMFYYWIIPESARWLLLKGRKDCAIANMQKAA 288
            .:.||.....:.||.:.|||:|...:::|.: :.:..|..:|||..:|         :::.|.  
 Worm   188 MWVVGACFLGLLAYILPDWRYLMFCISVPNIFVALLIYMTVPESLHFL---------VSSQQN-- 241

  Fly   289 RFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFL---- 349
              .|:|...|.:     .|...:..|...:||:: :.|   |.:...|....:.|..::::    
 Worm   242 --EKIEAWLEKI-----RGPKGDISASDIVEDRD-ENG---SSFKTLCREMWKHKMFIVYVLVMT 295

  Fly   350 -DWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLS 413
             .|:|.:.:|:||::.::||.||:.||||:...||.|||||..:.:|::||:.::.|..::||||
 Worm   296 YIWIVDTFIYFGLAFYSTNLAGNLYLNFVLMSLVEAPAYIFSPIFMNKYGRKVLISGTHIIAGLS 360

  Fly   414 LLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAP 478
            .|..|:..:..|   :...:|||.||:.|:.::|:|::|.|||..||..:|....::|..||::|
 Worm   361 FLGIVLSSEAWH---IHFWLLGKFAISCSFMSIYMFASEIFPTDGRNKCIGFCETLSRFGGMLSP 422

  Fly   479 FLNFLATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIAD 523
            :|:.|..:....|.:....:.:..|||:|:||||.|..:..|||:
 Worm   423 YLSHLTAVHALAPAITLSLIAVSGGLLTLILPETLNTKLPSTIAE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_651238.2 2A0119 11..520 CDD:273328 115/430 (27%)
B0252.3NP_001021888.1 MFS_SLC22 73..454 CDD:340875 105/405 (26%)

Return to query results.
Submit another query.