DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct2 and Svop

DIOPT Version :10

Sequence 1:NP_651238.2 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_599231.3 Gene:Svop / 171442 RGDID:620277 Length:548 Species:Rattus norvegicus


Alignment Length:461 Identity:117/461 - (25%)
Similarity:207/461 - (44%) Gaps:81/461 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFT 183
            ||.|   ..:..|...|:..:|::..|.::|.:||:||||..|..|:...:.:|:|:..||.|..
  Rat   114 EWRL---PSWQVALLTSVVFIGMMSSSTLWGNISDQYGRKTGLKISVFWTLYYGILSAFAPVYSW 175

  Fly   184 YTFARLMVGATTSGV--FLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH---DW 243
            ....|.:||....||  .:..|...:.|....|.:   :.:.:|:::|.:...:.|.||.   .|
  Rat   176 ILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCI---LLIEVFWAIGTVFEVLLAVFVMPSLGW 237

  Fly   244 RWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGE 308
            |||.:....|.|:|....:.:|||||:.:|.|.::.|||.:::.|..|...:   .|.:|:.  .
  Rat   238 RWLLLLSAAPLLVFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPM---PLGKLII--S 297

  Fly   309 NSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNL--GGN 371
            ..|::.|.:               |||. |:.|..|||::..|...:..||||...|:.|  .|:
  Rat   298 RQEDRGKMR---------------DLFT-PHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGD 346

  Fly   372 V-------------------------LLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAG 411
            |                         .::.:.:...|.|..:..|..::|.||:..:..|.|:..
  Rat   347 VCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFS 411

  Fly   412 L-SLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGM 475
            | |||..:.|.:.:.||::   .:.:..|:..:...|:::.|.:||..|.:.||..|.:||:..:
  Rat   412 LCSLLLFICIGRNVLTLLL---FIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGAL 473

  Fly   476 MAPFLNFL---ATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIADGERFGKKTKADVYL 537
            :.||:..:   ::::  |.|.:.....|:|.|.|..||       :||      .|:..:...:.
  Rat   474 ITPFIAQVMLESSVY--LTLAVYSGCCLLAALASCFLP-------IET------KGRALQESSHR 523

  Fly   538 ETGQEL 543
            |.|||:
  Rat   524 EWGQEM 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_651238.2 2A0119 11..520 CDD:273328 110/436 (25%)
SvopNP_599231.3 MFS_SVOP 87..509 CDD:340999 108/426 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..548 4/7 (57%)

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