DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Ust5r

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_599207.2 Gene:Ust5r / 171398 RGDID:620985 Length:552 Species:Rattus norvegicus


Alignment Length:561 Identity:151/561 - (26%)
Similarity:257/561 - (45%) Gaps:70/561 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALP-FENGSSYDLPTH 64
            |.:.|.:..:|..||:|.:....:.|.::.|..|.....|..|.|..||.:| .:|.:..|..:.
  Rat     1 MAFQELLNQVGSLGRFQILQMAFVFLINVSVVPHSTIENFTAAIPSHRCWVPILDNVTVSDNHSR 65

  Fly    65 LWN------LSYPEN-----ERC------SYYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSK 111
            :.|      :|.|.:     ::|      .::.:|..:.:  .|:..:  :|:.| ..:|||||.
  Rat    66 ILNQDKLLKISIPLDSHLRLDKCRRFAQPQWHLLDLNDTF--SSVTEA--DTEPCVDGWVYDRSN 126

  Fly   112 YLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAG 176
            :.::.||||:|||....:.:.:...||:|..:|.||.|.|||::|||.:|..:|:...:.....|
  Rat   127 FHSTTVTEWDLVCESQVLNSVTKFSFMIGAFIGGIVNGPLSDRFGRKFVLKCALLQMAITETCVG 191

  Fly   177 VAPEYFTYTFARLMVGATTSGVFLVA-----------YVVAMEMVGPDKRLYAGIFVMMFFSVGF 230
            .|..:|.|...|.:.|.|...:.:.:           ::..|.::.|    .||.|       |.
  Rat   192 FASNFFIYCSLRFLAGMTFEPILVNSNLLMFEWTSHKFLAMMSVIAP----CAGSF-------GS 245

  Fly   231 MLTAVFAYFVHDWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEI 295
            |:.|..|:...:|..||:|:::|...|:.....:.||||||::..:....:..::|.|..|.::.
  Rat   246 MILAGLAFQFQNWHHLQLAMSVPIFFFLILTRWLSESARWLIVTNKPQKGLKELRKVAHMNGMKN 310

  Fly   296 SDEALS-ELLDEGENSE-EKAKQKLEDQELDEGPPPSVWDLFCYPNLRRK-TLLIFLDWLVTSGV 357
            |.:.|: |::......| |.||.:           ||..|||..|.||:: ..:.|:..|....:
  Rat   311 SGDNLTMEVVRTSMKRELEAAKAR-----------PSPRDLFHTPILRKRICAMSFMRILFMLSI 364

  Fly   358 YYGLSWNTSNLGGNV-LLNFVISGA----VEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLAT 417
             :|:|.:..:|..|: ||.||:|.:    ..|..|:|     ||.|||......:.:.|:.:|..
  Rat   365 -FGMSLHLQHLSSNIMLLQFVVSASSLLFSVIGPYVF-----NRMGRRITQMVVMTLRGICILTA 423

  Fly   418 VIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNF 482
            |.:||.|..|.:....|.......|:|...:.:.|..||.:|..|:|...|.......:||....
  Rat   424 VFVPQEMQILRITVVTLAGAFSALSFGVNRLHTNELLPTTLRATAIGVIGMFGNSGFFLAPLFMI 488

  Fly   483 LATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIAD 523
            ||:....||.:..|..:::.|....|||||.|:|:.:.|.|
  Rat   489 LASYSPNLPWIFYGGFSILNGFTVFLLPETKNQPLPDCIHD 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 147/546 (27%)
MFS 127..503 CDD:119392 104/394 (26%)
Ust5rNP_599207.2 MFS_OAT 109..516 CDD:340932 120/436 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347100
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.940

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