DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and UST4r

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_599206.2 Gene:UST4r / 171397 RGDID:620976 Length:552 Species:Rattus norvegicus


Alignment Length:562 Identity:158/562 - (28%)
Similarity:265/562 - (47%) Gaps:48/562 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALP-FENGSSYDLPTH 64
            |.:.|.:..:|..||:|.:....:..||:.|..|.:...|..|.|..||.:| .:|.:..|..:.
  Rat     1 MAFQELLNQVGGLGRFQILQMVFVVFTSVIVVPHIIIENFTAAIPSHRCWVPILDNVTVSDNDSR 65

  Fly    65 LWN------LSYPEN-----ERC------SYYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSK 111
            :.|      :|.|.:     ::|      .::.:|..:.:.:.:.|    :|:.| ..:|||||.
  Rat    66 ILNQDKLLKISIPLDSHLRLDKCRRFAQPQWHLLDLNDTFSSITEP----DTEPCVDGWVYDRSN 126

  Fly   112 YLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAG 176
            :.::.||||||||....:.:.:...||:|..:|.||.|.|||::|||.||..:|:...:....||
  Rat   127 FHSTTVTEWNLVCESQALNSVTKLSFMIGAFIGGIVNGLLSDRFGRKFILKYALLQMAITETCAG 191

  Fly   177 VAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH 241
            .||..|.|...|.:.|.:...:.:...::..|...|.......:......|.|.|:.|..|:...
  Rat   192 FAPNLFIYCSLRFLAGMSLEPITVNINLLMFEWTSPKFLTMVTVLGSCAGSFGGMILAGLAFQFQ 256

  Fly   242 DWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEIS-DEALSELLD 305
            :|..||:|:::|...|:.....:.||||||::..:....:..::|.|..|.::.| |....|::.
  Rat   257 NWHHLQLAMSVPIFFFLILTRWLSESARWLIVINKPQKGLKELKKVAHINGMKKSGDNITMEVVR 321

  Fly   306 EGENSE-EKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKT-LLIFLDWL-VTSGVYYGLSWNTSN 367
            .....| |.||.:           ||..|||..|.||::. :|.|:..| :.|||  |::.:..:
  Rat   322 TSMKKELEAAKMR-----------PSPRDLFHTPILRKQIYILSFIRLLFILSGV--GVAIHLQH 373

  Fly   368 LGGNV-LLNFVISGAVEIPAYIFLLL---TLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLI 428
            |..|: ||..:||    :.:.:|.::   .||..|||......:.:.|:|:|..:..||.|.||.
  Rat   374 LSNNIELLQILIS----VSSILFSVIGHFVLNHIGRRITQMVIMFLRGISILTAIFAPQEMETLR 434

  Fly   429 VACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLL 493
            ...||:.:.....||....:.:.|..||.:|..|.|...|...|...:||....||:....||.:
  Rat   435 FIMAMMAEGLAALSYAANSLHANELLPTTLRATARGVIGMFGNIGFFLAPLCMMLASYSPNLPWI 499

  Fly   494 ICGSLTLVAGLLSLLLPETHNKPMLETIADGERFGKKTKADV 535
            ..|...:::|.:.||||||.|.|:.:...|.|...|:::.::
  Rat   500 FYGGFAILSGFIVLLLPETKNNPLPDCTHDVENDWKESRQEM 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 153/535 (29%)
MFS 127..503 CDD:119392 107/383 (28%)
UST4rNP_599206.2 MFS_OAT 109..516 CDD:340932 126/427 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347101
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.940

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