DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and svop

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_012825291.1 Gene:svop / 100492312 XenbaseID:XB-GENE-939906 Length:610 Species:Xenopus tropicalis


Alignment Length:486 Identity:124/486 - (25%)
Similarity:216/486 - (44%) Gaps:96/486 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFT 183
            ||.|   ..:..|...|:..:|::..|.::|.:||:|||:..|..|:...:.:|:|:..||.|..
 Frog   176 EWRL---PSWQVALLTSVVFIGMMASSSLWGNVSDQYGRRTGLKISVFWTLYYGILSAFAPVYSW 237

  Fly   184 YTFARLMVGATTSGV--FLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH---DW 243
            ....|.:||....||  .:..|...:.|....|.:   :.:.:|:::|.:...:.|.||.   .|
 Frog   238 ILVLRGLVGFGIGGVPQSVTLYAEFLPMKSRAKCI---LLIEVFWAIGTVFEVLLAIFVMPTLGW 299

  Fly   244 RWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGE 308
            |||.|...||..:|....:.:|||||:.:|.|.::.|:|.:::.|..|...:   .|.:|:    
 Frog   300 RWLLILSALPLFLFAILCFWLPESARYEVLSGNQEKALATLKRIATENGAPM---PLGKLI---- 357

  Fly   309 NSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNL--GGN 371
                     :..|| |.|   .:.|||. |..||.|||::..|...:..||||...|:.|  .|:
 Frog   358 ---------VSRQE-DRG---KIRDLFS-PQFRRTTLLLWFIWFSNAFSYYGLVLLTTELFQAGD 408

  Fly   372 V----------------------------LLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLV 408
            |                            ||...:|   |.|..:..|..::|.||:..:..|.:
 Frog   409 VCSISNQRKAVKPKCSLACEYLTVEDYTDLLWTTLS---EFPGVLITLWIIDRVGRKKTMAICFI 470

  Fly   409 MAGL-SLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARI 472
            :..| :||..:.:.:.:.|:.:   .:.:..|:..:...|:::.|.:||..|.:.||..|.:||:
 Frog   471 VFSLCALLLFLCVGRNVLTVFL---FIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARV 532

  Fly   473 SGMMAPFLNFL---ATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIADGERFGKKTKAD 534
            ..::.||:..:   ::|:  |.:|:.....::|.|.|..||       :||      .|:..:..
 Frog   533 GALITPFIAQVMLESSIY--LTVLVYSGCCVLAALASCFLP-------IET------KGRGLQES 582

  Fly   535 VYLETGQELRAPEAQPLKGSGETN-GSTIAN 564
            .:.|.|||        ::|.|..| |.|.:|
 Frog   583 SHREWGQE--------MEGRGTHNSGVTPSN 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 111/439 (25%)
MFS 127..503 CDD:119392 103/414 (25%)
svopXP_012825291.1 MFS_SVOP 149..571 CDD:340999 109/429 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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