DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a16

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_002936981.2 Gene:slc22a16 / 100488673 XenbaseID:XB-GENE-961385 Length:567 Species:Xenopus tropicalis


Alignment Length:550 Identity:182/550 - (33%)
Similarity:298/550 - (54%) Gaps:43/550 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPT-------HLW 66
            ::|.|||:|.:|||.....:|....|.||.||:...|.|.|..| ||.||..||.       .:|
 Frog     7 YVGHFGRFQALIYFSSAFQAISCGIHYLASVFIAITPKFICRAP-ENISSVLLPNASTLRLEDVW 70

  Fly    67 NLSYP--------------ENERCSYYDVDYTEEYLNGSIPRSSNETK-TCSS-YVYDRSKYLNS 115
            .|..|              |..:||.:..:.| .||..|.  ..|:|. :||: |.||.:...:|
 Frog    71 ELWTPKDYLVVKQENGDIWELNQCSRFKRENT-SYLTYSY--DGNKTLFSCSNGYYYDNTNLESS 132

  Fly   116 AVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPE 180
            .||:|:|||.|:::|......||.|||:|:::||.::|:.||:.||:.:...|.|||:......:
 Frog   133 IVTDWHLVCEREWLAKLIQPTFMFGVLIGAVIFGDIADRVGRRLILWLTSTGQFLFGIAVAFTFD 197

  Fly   181 YFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRW 245
            |:::...|.::...:||.::|.:|...|.||...|.:|.:.|..||:||.|:.::..:.|..|..
 Frog   198 YYSFVIVRFLLAMVSSGYYVVVFVYVTEYVGIKARSWASMHVHAFFAVGVMIVSLVGFLVRTWWM 262

  Fly   246 LQIALTLPGLIFMFYYWIIPESARWLLLKGRK---DCAIANMQKAARFNKVEISDEALSELLDEG 307
            .||.|:|..|.|:...|::||:..||..:|:.   :..|..::|   :||:....: ||||.   
 Frog   263 YQIILSLTTLPFVLCCWMLPETPFWLYSQGKHKEVEKLIGTIEK---WNKISTPCK-LSELC--- 320

  Fly   308 ENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNV 372
                  :.|:.:..|:|.....||.|||...:..|:|:.::|.|...|..||..:.|:.|||||.
 Frog   321 ------SVQETQKTEMDTLKKHSVLDLFYNWSFARRTVTVWLIWFTGSLGYYVFALNSVNLGGNE 379

  Fly   373 LLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKL 437
            .||..::.|||||:||.....:::.|||:.|...|:::.:.....::|||...|:.:|.:|.||.
 Frog   380 YLNLFLTSAVEIPSYIVACFGMDKIGRRNTLAPFLILSAVICGIIMLIPQDHSTVTIAMSMGGKF 444

  Fly   438 AITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVA 502
            :|..::|.:|:::||.:||:||::|:|:.||:.||..::|||..:|..:|..:|.::.|.:..:.
 Frog   445 SIAVAFGLIYLYTAELYPTIVRSLAVGSGSMMCRIGSVVAPFCVYLTDVWIFMPQMLVGIMAFLT 509

  Fly   503 GLLSLLLPETHNKPMLETIADGERFGKKTK 532
            |:|:|.||||...|:..||.:....|...:
 Frog   510 GVLTLKLPETLGVPLTSTIEEAAEMGTNNR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 179/534 (34%)
MFS 127..503 CDD:119392 122/378 (32%)
slc22a16XP_002936981.2 MFS_SLC22A16_CT2 111..517 CDD:340933 140/418 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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