DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a6

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_002937540.1 Gene:slc22a6 / 100487511 XenbaseID:XB-GENE-5842250 Length:552 Species:Xenopus tropicalis


Alignment Length:580 Identity:185/580 - (31%)
Similarity:295/580 - (50%) Gaps:49/580 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHL 65
            |.:.|.:..:|..||||.|...|:.|....:|.|.|...|..|.|..||.:   |||..:.    
 Frog     1 MAFQEILESIGGMGRYQVIHVVLLSLPVFMLASHNLMQNFTAAIPRHRCQI---NGSFEET---- 58

  Fly    66 WNLSYP------------ENERCSYYDVDYTEEY--LNGSIPRSSN--ETKTC-SSYVYDRSKYL 113
             |.:.|            |..:|..|.   |.:|  |..:..::.:  ||:|| ..:|||.|::.
 Frog    59 -NFTGPWLRALVPMKPTGEFSKCLRYT---TPQYHLLMDNFTQNVDELETETCVDGWVYDHSEFA 119

  Fly   114 NSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPI-LFASLVIQVLFGVLAGV 177
            ::.:|:|:|||....|...:.|::|.|||:||:|||.||||:||:|: ::::|.:.|. |:.|..
 Frog   120 STIITQWDLVCNHRRMRQVAQSIYMAGVLVGSVVFGGLSDKFGRRPLNIWSNLQMSVT-GICAAF 183

  Fly   178 APEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHD 242
            :|.|..|...|.:.|...||:.|.:|.:.:|.:....|.:........:::|.::....|:.:.|
 Frog   184 SPNYIWYCIFRFLTGTALSGIVLNSYSLIVEWIPTGNRAFTSTATGYCYTMGQLVLVGLAFMIRD 248

  Fly   243 WRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFN-KVEISDEALSELLDE 306
            |.|||:|.:||...:..|.|.||||.|||:|.|:.:.|...::|.|:.| |.|..::...|:|..
 Frog   249 WHWLQLAASLPFFFYFLYSWWIPESGRWLVLSGKPEVACKALKKVAKINGKKEAGEKLTVEVLKS 313

  Fly   307 GENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGN 371
            ....|..|.:.         ...||.||...|.:||.:..|...|..||..||||:.:..:.|.:
 Frog   314 SMQREISASKH---------STYSVLDLVRTPVVRRISFCISCTWFSTSFAYYGLALDLQSFGVS 369

  Fly   372 VLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGK 436
            :.:..:|.|.|:|||..|....:...|||.:....|::||:::|..:.:||...|:..:.|:.||
 Frog   370 IYIIQIIFGTVDIPAKFFSYFVMTYIGRRVLQALTLILAGIAILVNICVPQDYQTVRTSMAVFGK 434

  Fly   437 LAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLV 501
            ..:.||:..:::::.|.:|||:|...:|..:|:||:.|::||.......|:..|||:|.|.|.::
 Frog   435 GCLAASFNCLFLYTGELYPTVIRQSGMGLGTMMARLGGIIAPLAQMTGDIYHSLPLIIFGCLPIL 499

  Fly   502 AGLLSLLLPETHNKPMLETIADGERFGKKTKADVYLETGQELRAPEAQPLKGSGETNGST 561
            :|:....||||...|:.|||.|.|...||.|       ..||.|  ..|||.:...|..|
 Frog   500 SGIAGCFLPETLGVPLPETIEDVESSDKKQK-------NVELSA--KMPLKETELANWKT 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 167/527 (32%)
MFS 127..503 CDD:119392 121/377 (32%)
slc22a6XP_002937540.1 MFS_SLC22A6_OAT1_like 102..508 CDD:341004 135/415 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.140

Return to query results.
Submit another query.