DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a5

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_002934410.2 Gene:slc22a5 / 100486941 XenbaseID:XB-GENE-484416 Length:550 Species:Xenopus tropicalis


Alignment Length:551 Identity:195/551 - (35%)
Similarity:313/551 - (56%) Gaps:36/551 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWN 67
            ||:|...||::|.:|..::||:..:.||..|..|:.|||.|.|:.||.:|    .|.:|.....|
 Frog     4 YDQATAFLGEWGPFQVSVFFLLSASIIPNGFTGLSAVFLAATPEHRCHIP----ESANLSAAWRN 64

  Fly    68 LSYP----ENERCSYYDVDYTEEY-----LNG-SIPRSSNETKTC-SSYVYDRSKYLNSAVTEWN 121
            .|.|    ::.:|..|.:.....|     |.| .:..:..|.:.| ..:.|.:|.||::.|||||
 Frog    65 ASIPRQDGQDSQCRRYRLGTLTNYSALGLLPGRDVDVTGIEQEPCLDGWNYSKSLYLSTIVTEWN 129

  Fly   122 LVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTF 186
            |||..|:....:.|||.:|||:||.|.||:||::|||.:|||::.:|..|.::...:..:..:|.
 Frog   130 LVCENDWKGPLTTSLFFVGVLIGSFVSGQMSDRFGRKKVLFATMAVQTGFSIIQVFSVNWEMFTA 194

  Fly   187 ARLMVGATTSGVFLVAYVVAMEMVGPDKR-LYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIAL 250
            ..::||......::.|:::..|::....| :::.:.|.:|:::|:||..:||||:.|||.|.:||
 Frog   195 LFIIVGMGQISNYVAAFILGAEILDKSVRIIFSTLGVCIFYAIGYMLLPLFAYFIRDWRTLLLAL 259

  Fly   251 TLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAK 315
            |:|||..:..:||||||.|||:.:||...|...::|||:.|.:...|...        |..|..:
 Frog   260 TIPGLFCIPLWWIIPESPRWLISQGRFQEAEDIIRKAAKKNGITPPDSIF--------NFTELQE 316

  Fly   316 QKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISG 380
            ||    ||.. ...:..||....|:|..|.|..|.|::.|..|:|||.||.||.|:..:|..:|.
 Frog   317 QK----ELTH-KSHTFLDLLKTRNIRIITFLSILLWMIISVGYFGLSLNTPNLHGDPYVNCFLSA 376

  Fly   381 AVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITASYGT 445
            .:|:|||:...|.|..:.||......||:.|:.||...::||.:..|.:...||||..||:::..
 Frog   377 IIEVPAYVIAWLLLRSFPRRYSTASTLVLGGVVLLFIQLVPQELGILSIVLVMLGKFGITSAFSM 441

  Fly   446 VYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLSLLLP 510
            ||:::||.:||||||:.:||:||.:|:..:::|:..:|....:.||.::.||||::.|:.:|.||
 Frog   442 VYVYTAELYPTVVRNMGVGASSMASRMGSILSPYFVYLGAYDRFLPFILMGSLTVLIGMFTLCLP 506

  Fly   511 ETHNKPMLETIAD-----GERF--GKKTKAD 534
            |:|..|:.:||.:     |.|:  ||:.|.|
 Frog   507 ESHGMPLPDTIEEMLRVKGFRYKAGKRLKKD 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 183/520 (35%)
MFS 127..503 CDD:119392 135/376 (36%)
slc22a5XP_002934410.2 2A0119 12..516 CDD:273328 183/520 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 348 1.000 Inparanoid score I2245
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm14089
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.180

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