DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a31

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_012817743.1 Gene:slc22a31 / 100485676 XenbaseID:XB-GENE-6048942 Length:558 Species:Xenopus tropicalis


Alignment Length:590 Identity:145/590 - (24%)
Similarity:248/590 - (42%) Gaps:79/590 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWNLSYPENE 74
            :|.||||.:::.....|.::.:|....:.:...|.|.::|     .|.|.|              
 Frog    11 VGGFGRYTRLLAAATWLPNVALAMGFFSELMYTAVPSYQC-----QGVSGD-------------- 56

  Fly    75 RCSYYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLNS-AVTEWNLVCGRDFMAATSDSLF 137
            .|..          |.|...|||:::.| ..:.:....:||| .||:|.|:|.|.:........:
 Frog    57 PCPG----------NSSWENSSNQSQHCPGGWHFQAQGWLNSNIVTQWELLCDRQWKVPLEKISY 111

  Fly   138 MLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFLVA 202
            ::|.|||.|:||.:.|:.||:.....:||:.:..||.......||::...|...||..:|:||..
 Frog   112 LVGWLLGYIIFGCICDRLGRRAAFIGALVMALPLGVAVTFTSSYFSFLPLRAGFGAALAGMFLSF 176

  Fly   203 YVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIALTLPGLIFMFYYW----I 263
            |:..:|:..|.:||...:....|:..|.:|....|....|||.||.::| ..|:.:..||    :
 Frog   177 YISRVELCSPSQRLMVTMIGGFFWVAGELLLPGMAVLCSDWRVLQGSIT-GTLMLLGVYWCGHTL 240

  Fly   264 IPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEG-P 327
            .|||.||||...:.:...:.:...||.|.:.|           ||::..:.....|...|.|| |
 Frog   241 YPESPRWLLATQQVEQCKSELHMFARANGINI-----------GEDASGQDHVFTEIDSLCEGFP 294

  Fly   328 PP---SVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIF 389
            .|   |:..:|....:.|..|::.....:..|:....:.|....|  ..:.:.:....||.|.|.
 Frog   295 RPQYYSICSIFGTRLIWRNALILGFTAFIGCGIRPCFARNLQVFG--PYIPYFLQAGSEIVACIL 357

  Fly   390 LLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYI---FSA 451
            :.:.::..||||:|....::.|...|..:.:.| :...|.|..::..:....|:..|.:   ::.
 Frog   358 ICICVSHCGRRSVLLLFTILTGFCSLLLLALTQ-LDLFIEASIVISVVGSLCSHAVVMLSVFYAC 421

  Fly   452 EQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLSLLLPETHNKP 516
            |..|||:|...||....:..:.....||:.........|..::..|..:::.|..||||||..|.
 Frog   422 EVLPTVIRGSGLGLIMGINMLGRASLPFIELQHKSGYFLYHVVLSSFCILSVLSLLLLPETKRKS 486

  Fly   517 MLETIADGE-------------------RFGKKTKADVYLETGQELRAPEAQPLKGSGETNGSTI 562
            :.||:..||                   :.||| :||...::...|.:...:.::  .:|.|||.
 Frog   487 LPETLRHGENLRRPPLLLHPTQDTLPLLKHGKK-RADYNPDSYARLASSTKKMIR--SDTTGSTC 548

  Fly   563 ANGHK 567
            ...:|
 Frog   549 GEENK 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 130/521 (25%)
MFS 127..503 CDD:119392 93/386 (24%)
slc22a31XP_012817743.1 MFS 110..470 CDD:119392 93/374 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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