DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and zmp:0000001102

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_001340340.6 Gene:zmp:0000001102 / 100000058 ZFINID:ZDB-GENE-140106-62 Length:560 Species:Danio rerio


Alignment Length:570 Identity:177/570 - (31%)
Similarity:279/570 - (48%) Gaps:47/570 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHL 65
            |.:|..:.....|||||..:..|:.:..|.:..|.|...|:.|.|...|.:     ||.| ...|
Zfish    11 MKFDNILDETDGFGRYQIALVMLLFIPRITIPCHFLLNNFIAAIPSHHCDI-----SSLD-ADGL 69

  Fly    66 WNL--------SYPENE-----RCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAV 117
            .||        |.|..|     .|..:.....:..:|.|...:....:..:.:.:|.|.::::..
Zfish    70 GNLTQKERLIVSVPAQEDGTPASCHMFAHPQFQLLINSSSSSALPVVECQNGWHFDNSTFISTLA 134

  Fly   118 TEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYF 182
            |:::|||.:..:|..|.::|.:||:.|::.||.|.|||||:.:|..|.|..::|.|.:..:..|.
Zfish   135 TQFDLVCDKRGLAKASATIFFVGVMCGAVFFGVLCDKYGRRSMLLVSYVFSIVFSVTSAFSSSYI 199

  Fly   183 TYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQ 247
            .:...|.:.|...:|:..::.|:::|.|....|.:.|:|..|.:|:|.||.|.||:.|.|||.|.
Zfish   200 MFAAFRFLTGLALTGISNISVVLSIEWVDTKHRTFMGLFGSMSWSIGNMLLAGFAFMVTDWRLLI 264

  Fly   248 IALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNK-----VEISDEALSELLDEG 307
            :.:|.|..:....:|.||:|||||:..|:.:.|...:.|.|.|||     ..:..|.||.::...
Zfish   265 VIVTAPLFLATATWWWIPDSARWLIANGKTETAYKYLHKCATFNKRLDFTSRVKPETLSTVVTVD 329

  Fly   308 ENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNV 372
            .                .|...:..||...|.||:.||...:.|...:..|||:|.|.:..|.:.
Zfish   330 H----------------RGHSYTYLDLVKTPQLRKLTLFTGIVWYGVASTYYGISLNITGFGLDP 378

  Fly   373 LLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKL 437
            .|...|..|:|:||.|.:..:||:.|||:...|.||:.|..:|..:|.|....|.....|:|||.
Zfish   379 YLTHFIYAAIEVPAKILVYFSLNKVGRRNTQTGTLVLTGFCILINIITPTEYWTFRTVIAVLGKG 443

  Fly   438 AITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVA 502
            ...||:.||.:::.|.:|||:|...||..:.:||:...::|.:..|..|||.||.:|..|:.:..
Zfish   444 LSEASFTTVILYTTELYPTVMRQNGLGFTNFMARMGASISPLIMLLEDIWKLLPEVIFCSMAIFC 508

  Fly   503 GLLSLLLPETHNKPMLETIADGERFGKKTKADVYLETGQELRAPEAQPLK 552
            |:::||||||:|..:.||:.|.|...||   .||..|..:    .|.|||
Zfish   509 GIIALLLPETNNASLPETVEDIEDMRKK---PVYFTTADQ----SAMPLK 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 162/526 (31%)
MFS 127..503 CDD:119392 123/380 (32%)
zmp:0000001102XP_001340340.6 Sugar_tr 22..526 CDD:331684 162/525 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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