DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and XIE

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_175858.1 Gene:XIE / 841898 AraportID:AT1G54560 Length:1529 Species:Arabidopsis thaliana


Alignment Length:1306 Identity:417/1306 - (31%)
Similarity:610/1306 - (46%) Gaps:273/1306 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VWVRDAAEGYIQGRITEIGAKEFEVTPTDRK---------YPKRTCHFDDIHSSCDGPQDHDDNC 63
            ||:.|:...:|.|.:.:|..::.||..|:.|         |||      |:.:...|.   ||..
plant    16 VWIEDSDVAWIDGLVEKINGQDVEVQATNGKKITAK
LSKIYPK------DMEAPAGGV---DDMT 71

  Fly    64 ELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVF 128
            :|..|:|...|.|||.||..::||||..|||||:||::.:..:|....:::|.|...|||.||||
plant    72 KLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVF 136

  Fly   129 AIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSA----GPIETKILDANPVL 189
            |:||.|.|.|.....|.||:|||||||||||:||.|::||.|....|    ..:|.::|::||||
plant   137 AVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAVTEGRTVEQQVLESNPVL 201

  Fly   190 EAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAG 254
            ||||||||.|||||||||||:|:.:|.:.::.|..:..||||:||:|..|..|||||.||:|.| 
plant   202 EAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA- 265

  Fly   255 APQQLRDKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNL 319
            |||:..:|..||.|..:.||:                   :||..:..|      |.|...:...
plant   266 APQEELEKYKLGHPKTFHYLN-------------------QSKCFELVG------ISDAHDYIAT 305

  Fly   320 DKALGRLGLSDTEKLGIYSLVAAVLHLGNIAF-------EEIPDDVRGGCQVSEASEQSLTITSG 377
            .:|:..:|:|:.|:..|:.:|||:|||||:.|       ..:|.|        :.|:..|...:.
plant   306 RRAMDIVGMSEKEQEAIFRVVAAILHLGNVEFTKGKEVDSSVPKD--------DKSKFHLNTVAE 362

  Fly   378 LLGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQS 442
            ||..|...|..||..|||.:     ...||...|....|..:||.|||.|||||||.:|..||.|
plant   363 LLMCDVKALEDALCKRVMVT-----PEEVIKRSLDPQSALISRDGLAKTIYSRLFDWLVEKINVS 422

  Fly   443 IPFQA-SNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEI 506
            |...| |...||||||.|||.|..|||||||||:.|||||:.||.::.|.|||.|.:|.::...|
plant   423 IGQDATSRSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYI 487

  Fly   507 TFTDNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLKAHRTL 571
            .|.||||:::|||.|..||..||||....||.::..|..::::::..|.|...|:.||       
plant   488 EFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSR------- 545

  Fly   572 RDEEGFLVRHFAGAVCYNTEQFIEKNNDAL---HASLEGLVQECDNPLLQTLFPS-GSSTSVRGK 632
               ..|.|.|:||.|.|.::.|::||.|.:   |..|.| ..:|  |.:..|||. ...||...|
plant   546 ---TDFAVAHYAGEVQYQSDLFLDKNKDYVIPEHQDLLG-ASKC--PFVVGLFPPLPEETSKSSK 604

  Fly   633 LNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELME 697
              |.|:||:||.||.:|||.|.....::|||:|||:.:....||....:.||:|.|.:..:.:..
plant   605 --FSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISC 667

  Fly   698 HGYPSRVLFADLYSMYKSVLPPELVSLPARTFCEAMFQSL--NLSAKDFKFGITKVFFRPGKFVE 760
            .|||:|..|.:..:.:..:.|.   :|......:|..|.:  |:..|.::.|.||||.|.|:..|
plant   668 AGYPTRKPFFEFINRFGLLYPR---ALEGNYEEKAAAQKILDNIGLKGYQVGKTKVFLRAGQMAE 729

  Fly   761 FD--RIMRSDPENMLAIVAKVKKWLIRS----------RWVKSALGALCVIKLRNRII------- 806
            .|  |.|      :|:..||..:..||:          |....:|.|||..:|.::|.       
plant   730 LDARRTM------VLSAAAKKIQRRIRTHQAQRRFILLRKATISLQALCRGRLSSKIFDNLRRQA 788

  Fly   807 -----------------YRNKCV--LIAQRIARGFLARKQHRPRYQGIGKINKIRTN-------- 844
                             |:|..|  |:.|...|...|.||.|.|.|     .|..|.        
plant   789 AAVKIQKNARRLHSRKSYKNLHVAALVVQTGLRAMAAHKQFRFRKQ-----TKAATTIQAQFRCH 848

  Fly   845 --TLKTIEIASGL---------KMGREEIISGVNDIYRQIDDAIKK---IKMNPRITQREMDSMY 895
              ||...::..|:         |:.|.|:        ||:..|.::   :|....:.:::::.: 
plant   849 RATLYFKKLKKGVILSQTRWRGKLARREL--------RQLKMASRETGALKEAKDMLEKKVEEL- 904

  Fly   896 TVVMANMNKLT-VDL----NTKLKEQQQAEEQERLRKIQEA---LEAER-AAKEAEEQRQ----- 946
             ...|.:.|.: |||    |.::|:.|.:.|:.| :|:.|.   |..|| |||:|.|:..     
plant   905 -TYRAQLEKRSRVDLEEEKNQEIKKLQSSLEEMR-KKVDETNGLLVKEREAAKKAIEEAPPVVTE 967

  Fly   947 --------------REEIENKRLKAEMETR------RKAAEAQRLRQEEEDRRAALALQEQLEKE 991
                          .||:|..:...|.|.:      ||..|||   :..|||:          |:
plant   968 TQVLVEDTQKIEALTEEVEGLKANLEQEKQRADDATRKFDEAQ---ESSEDRK----------KK 1019

  Fly   992 AKDDAKYRQQLEQERRDHELALRLANESNGQVEDSPPVIRNGVNDASPMGPNKLIS-FSQVVSNI 1055
            .:|..|..|||:      |...||..:.| .:|....|:|   ..|..:.|||.:| .|:.:...
plant  1020 LEDTEKKAQQLQ------ESVTRLEEKCN-NLESENKVLR---QQAVSIAPNKFLSGRSRSILQR 1074

  Fly  1056 ASRYLNKSENVRAQQQALGKQKYDLSKWKYSELRDAINTSCDIELLEACRQEFHRRLKVYH---- 1116
            .|...:.|.:.|   .:|....:.:::...||:.|....|.:.:..|  .||...|..|.|    
plant  1075 GSESGHLSVDAR---PSLDLHSHSINRRDLSEVDDKPQKSLNEKQQE--NQELLIRCIVQHLGFQ 1134

  Fly  1117 ---------------AWKAKNRKRTTMDENERAPRSVMEAAFKQPPLVQPIQEIVTAQHRYFRIP 1166
                           .|::...:||::.:.                ::|.|.:.:..|.....:.
plant  1135 GKRPVTACIIYKCLLQWRSFEVERTSVFDR----------------IIQTIGQAIETQDNNNILA 1183

  Fly  1167 FMRANA 1172
            :..:||
plant  1184 YWLSNA 1189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832 13/45 (29%)
Myosin_head 59..754 CDD:278492 286/712 (40%)
MYSc_Myo6 71..754 CDD:276833 281/700 (40%)
RILP-like <968..1015 CDD:304877 12/46 (26%)
Myosin-VI_CBD 1160..1246 CDD:293129 2/13 (15%)
XIENP_175858.1 Myosin_N 14..51 CDD:280832 10/34 (29%)
MYSc 66..734 CDD:214580 291/727 (40%)
MYSc_Myo11 79..723 CDD:276835 281/700 (40%)
type_I_hlyD 723..>980 CDD:130902 62/278 (22%)
ApoLp-III_like <889..1026 CDD:304399 36/152 (24%)
TPR_MLP1_2 907..1054 CDD:285204 46/170 (27%)
bZIP <1016..1052 CDD:304365 13/52 (25%)
MyosinXI_CBD 1114..1495 CDD:271259 14/94 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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