DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and Myo1e

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_011241116.1 Gene:Myo1e / 71602 MGIID:106621 Length:1119 Species:Mus musculus


Alignment Length:1109 Identity:328/1109 - (29%)
Similarity:518/1109 - (46%) Gaps:215/1109 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELP 124
            ||...|..:.|::.::|||.||..|.|:||:.::||:|||:::: ..:....::.|.|.:..|.|
Mouse    34 DDMVLLSKITESSIVENLKKRYMDDYIFTYIGSVLISVNPFKQM-PYFGEKEVEMYQGAAQYENP 97

  Fly   125 PHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAG-----PIETKILD 184
            ||::|:||...|:|.:.:.:|.:|:|||||||||.:.||::.|:  |..|.|     .::..||.
Mouse    98 PHIYALADSMYRNMIIDRENQCVIISGESGAGKTVAAKYIMSYV--SRVSGGGPKVQHVKDIILQ 160

  Fly   185 ANPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFY 249
            :||:|||||||||.||||||||||:.|:.:....:..||.||::||||||:..::..||::|:||
Mouse   161 SNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSPGGEPDGGKISNFLLEKSRVVMRNPGERSFHIFY 225

  Fly   250 MLLAGAPQQLRDKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQ 314
            .|:.||..:.:..|.:...|.|.|||              :.||.|..:           |||.:
Mouse   226 QLIEGASPEQKQSLGITSMDYYYYLS--------------LSGSYKVDD-----------IDDKR 265

  Fly   315 HFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLL 379
            .|.....|:..:|:...|:..:..:||.:||||||:|:|:      |...:..||:.|...:.||
Mouse   266 DFQETLHAMNVIGIFSEEQTLVLQIVAGILHLGNISFKEV------GNYAAVESEEFLAFPAYLL 324

  Fly   380 GVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIP 444
            |::|..|:..|.||.|.||.|| |...|.|.|.:.:|...|||||||:::|:||.:|..||:::.
Mouse   325 GINQDRLKEKLTSRQMDSKWGG-KSESIHVTLNVEQACYTRDALAKALHARVFDFLVDSINKAME 388

  Fly   445 FQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFT 509
            .....:.||||||.|||.|..|.|||||||:.|||||:.|.:..||.|||.|.:||:....|.:.
Mouse   389 KDHEEYNIGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIEYF 453

  Fly   510 DNQDIIELIEAKSN--GIFTLLD-------------EESKLPK-----PSYSHFTAEVHKSWANH 554
            :|:.:.:|||:|.|  ||.::||             :::.|.|     .|:.||     .||   
Mouse   454 NNKIVCDLIESKVNPPGIMSILDDVCATMHAVGEGADQTLLQKLQMQIGSHEHF-----NSW--- 510

  Fly   555 YRLGLPRSSRLKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQT 619
                               .:||::.|:||.|.|:.:.|.|:|.|.|...|..|:|..:.|.:::
Mouse   511 -------------------NQGFIIHHYAGKVSYDMDGFCERNRDVLFMDLIELMQSSELPFIKS 556

  Fly   620 LFPSGSSTSVRGKLNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQL 684
            |||.......:|:..  :.|||.|.|..:|:..|.:...::|||||||.....:.:|.|....|:
Mouse   557 LFPENLQADKKGRPT--TAGSKIKKQANDLVSTLMKCTPHYIRCIKPNETKKPKDWEESRVKHQV 619

  Fly   685 KCSGTISVLELMEHGYPSRVLFADLYSMYKSVLPPELVSLPARTFCEA-----MFQSLNLSAKDF 744
            :..|....:.:...||..|.:|......| ::|..  .:.|.....|.     :.||:|:.:..|
Mouse   620 EYLGLKENIRVRRAGYAYRRVFQKFLQRY-AILTK--ATWPVWRGDEKQGVLHLLQSVNMDSDQF 681

  Fly   745 KFGITKVFFR-PGKFVEFDRIMRSDPENMLAIVAKV-KKWLIRSRWV--KSALGALCVIKLRNRI 805
            :.|.:|||.: |......:.:.....:....::.|. :|::.|.::|  :.....|.:.|...| 
Mouse   682 QLGRSKVFIKAPESLFLLEEMRERKYDGYARVIQKTWRKFVARKKYVQMREEASDLLLNKKERR- 745

  Fly   806 IYRNKCVLIAQRIARGFLA---RKQHRPRYQG-IGKINKI--RTNTLKTIEIASGLK-------- 856
              ||.       |.|.|:.   ..:.||..|. :||..||  .....|......|:|        
Mouse   746 --RNS-------INRNFIGDYIGMEERPELQQFVGKREKIDFADTVTKYDRRFKGVKRDLLLTPK 801

  Fly   857 ----MGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMYTVVMANMNKLTVDLNTKLKEQQ 917
                :|||::..|.       |..:.|..:..||   |::.:          |:|.|:|...:..
Mouse   802 CLYLIGREKVKQGP-------DKGVVKEVLKRRI---EVERI----------LSVSLSTMQDDIF 846

  Fly   918 QAEEQERLRKIQEALEAE---RAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRR 979
            ...|||....::...:.|   ..||..||:.|      |:|..:...                  
Mouse   847 ILHEQEYDSLLESVFKTEFLSLLAKRYEEKTQ------KQLPLKFSN------------------ 887

  Fly   980 AALALQEQLEKE--AKDDAKYRQQLEQERRDHELA-LRLANE------SNGQVEDSPPVIRNGVN 1035
               .|:.:|:||  ....|...:|::..:...:|| |:.:|:      ..|..::|.|..||.|.
Mouse   888 ---TLELKLKKENWGPWSAGGSRQVQFHQGFGDLAILKPSNKVLQVSIGPGLPKNSRPTRRNTVT 949

  Fly  1036 D--------------ASPMGP---------NKLI----SFSQVVSNIASRYLNKSENVRAQQQAL 1073
            .              |:|..|         |:.:    :|....||..|.|.:.:.....:||:.
Mouse   950 SRGYPGGTKNNYPMRAAPAPPGCHQNGVIRNQFVPPPHAFGNQRSNQKSLYTSMARPPLPRQQST 1014

  Fly  1074 GKQK 1077
            |..:
Mouse  1015 GSDR 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 253/723 (35%)
MYSc_Myo6 71..754 CDD:276833 249/712 (35%)
RILP-like <968..1015 CDD:304877 9/49 (18%)
Myosin-VI_CBD 1160..1246 CDD:293129
Myo1eXP_011241116.1 MYSc_Myo1 45..691 CDD:276829 249/712 (35%)
Myosin_TH1 731..932 CDD:368706 52/257 (20%)
SH3_MyoIe_If_like 1067..1118 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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