DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and MYO1G

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_149043.2 Gene:MYO1G / 64005 HGNCID:13880 Length:1018 Species:Homo sapiens


Alignment Length:799 Identity:260/799 - (32%)
Similarity:403/799 - (50%) Gaps:82/799 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ELMLLNEAT---FLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPP 125
            :.:||::.|   |:.||:.|:.|.:||||:..:|::||||:|: .||.|:.|.:|.||.|.|.||
Human    13 DFVLLDQVTMEDFMRNLQLRFEKGRIYTYIGEVLVSVNPYQEL-PLYGPEAIARYQGRELYERPP 76

  Fly   126 HVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIETK-----ILDA 185
            |::|:|:.|.:.|:.......|::||||||||||::|::::|:....:.:...|.:     :|.:
Human    77 HLYAVANAAYKAMKHRSRDTCIVISGESGAGKTEASKHIMQYIAAVTNPSQRAEVERVKDVLLKS 141

  Fly   186 NPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYM 250
            ..||||||||:|.||:|||||||::::::|.|...:||:|..|||||||:..|...|||:|.||.
Human   142 TCVLEAFGNARTNRNHNSSRFGKYMDINFDFKGDPIGGHIHSYLLEKSRVLKQHVGERNFHAFYQ 206

  Fly   251 LLAGAPQQLRDKLSLGK-PDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKG---PLKDPIID 311
            ||.|:..:...:|.|.: |..|.:                        .||..|   .:...:..
Human   207 LLRGSEDKQLHELHLERNPAVYNF------------------------THQGAGLNMTVHSALDS 247

  Fly   312 DYQHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQ---VSEASEQSLT 373
            |.|....:.:|:..:|.|..|...::.::||:||||||.|.|..:   ||.|   ::.|.|..:.
Human   248 DEQSHQAVTEAMRVIGFSPEEVESVHRILAAILHLGNIEFVETEE---GGLQKEGLAVAEEALVD 309

  Fly   374 ITSGLLGVDQTELRTALVSRVMQSKGGGF--KGTVIMVPLKIYEASNARDALAKAIYSRLFDRIV 436
            ..:.|....:..:..:|::|.:.|.|...  ||....      |||.||||.|||:|.|||:.:|
Human   310 HVAELTATPRDLVLRSLLARTVASGGRELIEKGHTAA------EASYARDACAKAVYQRLFEWVV 368

  Fly   437 GLINQSIP-------FQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQE 494
            ..||..:.       ....:..||||||.|||.|.|||||||||||||||||:.|...|||.|||
Human   369 NRINSVMEPRGRDPRRDGKDTVIGVLDIYGFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQE 433

  Fly   495 LYKREGLNVPEITFTDNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVH-KSWANHYRLG 558
            .|:|||:....:.:.:|..|::|:|....||..:|||...    |....|..:. ::...|:|..
Human   434 EYEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACS----SAGTITDRIFLQTLDMHHRHH 494

  Fly   559 LPRSSR--LKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLF 621
            |..:||  ....:|:.....|.::|:||.|.|:.|.||:||.|.|....:.|:....:|.|:.::
Human   495 LHYTSRQLCPTDKTMEFGRDFRIKHYAGDVTYSVEGFIDKNRDFLFQDFKRLLYNSTDPTLRAMW 559

  Fly   622 PSGSSTSVRGKLNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKC 686
            |.|...........::.|:.||..:..|:|.|......::||||||...:..:.:.:....|:..
Human   560 PDGQQDITEVTKRPLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGKLDENHCRHQVAY 624

  Fly   687 SGTISVLELMEHGYPSRVLFADLYSMYKSVL----PPELVSLPARTFCEAMFQSLNLSAKDFKFG 747
            .|.:..:.:...|:.||..::.....||...    |..|:. ..:....|:.:...|.. |..||
Human   625 LGLLENVRVRRAGFASRQPYSRFLLRYKMTCEYTWPNHLLG-SDKAAVSALLEQHGLQG-DVAFG 687

  Fly   748 ITKVFFR-PGKFVEFDRIMRSDPENMLAIVAKV--KKWL-IRSRWVKSALGALCVIKLRNRIIYR 808
            .:|:|.| |...|..::    ....::.|:..:  |.|. ..:||....|.|:..|.   |...|
Human   688 HSKLFIRSPRTLVTLEQ----SRARLIPIIVLLLQKAWRGTLARWRCRRLRAIYTIM---RWFRR 745

  Fly   809 NKCVLIAQRIARGFLARKQ 827
            :|.......:.|.|.|.:|
Human   746 HKVRAHLAELQRRFQAARQ 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670
MYSc_Myo6 71..754 CDD:276833 240/713 (34%)
CBD_MYO6-like 765..913 CDD:409646 15/66 (23%)
ERM_helical <954..1020 CDD:466641
MYO6_MIU_linker 1002..1093 CDD:480843
MyUb_Myo6 1076..1116 CDD:439319
Myosin-VI_CBD 1160..1246 CDD:465157
MYO1GNP_149043.2 MYSc_Myo1 23..694 CDD:276829 239/710 (34%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 584..606 8/21 (38%)
Myosin_TH1 815..980 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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