DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and myo1ha

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_009299653.1 Gene:myo1ha / 556606 ZFINID:ZDB-GENE-060531-78 Length:1059 Species:Danio rerio


Alignment Length:1081 Identity:328/1081 - (30%)
Similarity:523/1081 - (48%) Gaps:159/1081 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADK 133
            :|..||||||.|:.:|.||||:..:||:||||:|: ::|....:..|.|.:..|||||::|:||.
Zfish    59 SETAFLDNLKKRFTEDLIYTYIGTLLISVNPYKEL-DIYTKKQMDLYMGVNFFELPPHIYALADN 122

  Fly   134 AIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIET---KILDANPVLEAFGNA 195
            |...|.....:..|::||||||||||::|.:|:|...|..|:..::|   ::|.:||||||||||
Zfish   123 AYHTMLSEANNHFILISGESGAGKTEASKKILQYYAVSCPSSTLLDTVRDRMLMSNPVLEAFGNA 187

  Fly   196 KTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLR 260
            ||.:|:|||||||::::.:|.:...|||:|..|||||||:..|:..|||:|:||.|:.|..:.|.
Zfish   188 KTMKNDNSSRFGKYMDIQFDIQGDAVGGHILSYLLEKSRVVHQNHGERNFHIFYQLVEGGEEDLL 252

  Fly   261 DKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALGR 325
            .:|.|.: |..||   |          .|:.|...:.:.          |:|...:..:..||..
Zfish   253 RQLGLER-DTKRY---C----------YLVQGECSNVSS----------INDKNDWKTVKNALSV 293

  Fly   326 LGL--SDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLLGVDQTELRT 388
            :..  ||||.|  :.::::||||||:.|:.   |.:|...::  |..:|...|.||||....|..
Zfish   294 IDFDASDTEHL--FGIISSVLHLGNVHFDR---DTKGYAILN--SNAALRWVSKLLGVHVQVLHG 351

  Fly   389 ALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQAS--NFY 451
            ||..|.:::     |...::.|..:..|..||||||||||.|.|..:|..||:|:..:.|  ...
Zfish   352 ALTFRKIEA-----KSEEVLSPYTVDHAIYARDALAKAIYDRAFTWLVNRINESLENKDSERKTV 411

  Fly   452 IGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDIIE 516
            ||:|||.|||.||.||||||||||||||||:.|....||.|||.|:.||:....:.|.:|:.|.:
Zfish   412 IGLLDIYGFEVFTANSFEQFCINYCNEKLQQLFIQLTLKAEQEEYEAEGIGWEPVQFFNNKIICD 476

  Fly   517 LIEAKSNGIFTLLDEESKLPKPSYS-HFTAEVHKSWANHYRLGLPRSSRLKAHRTLRDEEG-FLV 579
            |:|.|..||.::||||...|..:.. .|..::.:...||......:.:..|..::|  |.| |.:
Zfish   477 LVEEKHRGIISVLDEECVRPGDATDLTFLEKLEEKMGNHPHFVTHKLADKKTRKSL--ERGDFRL 539

  Fly   580 RHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNFISVGSKFKT 644
            .|:||.|.|....||:||||.|:.:::.:::...||::|..||   :|....:....:|.::||.
Zfish   540 LHYAGEVTYCVVGFIDKNNDLLYKNIKDMMRLSKNPIIQQCFP---ATKAESRRRPETVATQFKN 601

  Fly   645 QLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADL 709
            .|..|.|.|......::||:|.|......:|:..|...|:|..|.:..|.:...|:..|..:...
Zfish   602 SLLRLTEILTAKEAWYVRCLKSNDNKQQGKFDEVLVRHQVKYLGLMEHLRVRRAGFAYRRKYEVF 666

  Fly   710 YSMYKSVLP---PELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGK--FVEFDRIMRSDP 769
            ...||.:.|   |....:|:.. .|.:.|.|.....::|.|.||:|.|..:  |...|.......
Zfish   667 LKRYKPLCPATWPHWRGVPSEG-VEKLVQHLGYQPDEYKMGRTKIFIRYARTLFATEDAFEICKH 730

  Fly   770 ENMLAIVAKVKKWLIRSRWVKSALGALCV------IKLRNRIIYRNKCVLIAQRIARGFLARKQH 828
            |....:.||.|.:.::..:.|....|..:      ::.|.....|...|.:.::..:|:|.|::.
Zfish   731 ELATKLQAKYKGYKVKGEFRKQKEAATKIETCWRGVQARKERDRRAWAVKVIKKFIKGYLTRREA 795

  Fly   829 ------------RPRYQGIGKINKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIK 881
                        |..|     :|:::.|..||: :.....:....:::..::|.|::...:...|
Zfish   796 KTTDNSEYLAFVRQSY-----LNRLKANLPKTV-LDKTTWLTPPPVMTETSEILRKLHTRMMVRK 854

  Fly   882 MNPRIT-QREMDSMYTVVMANMNKLTVD----------LNTKLKEQQ------QAEEQERLRKIQ 929
            ....|| |::......||.:.:.|...|          ::|::.||.      |....||::...
Zfish   855 YVRGITPQKKAQMQQKVVTSAIFKGKKDSYPSSIAVPFVDTRINEQDINMRVLQTIRHERIKYSV 919

  Fly   930 EALEAERAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRRAALALQEQLEKEAKD 994
            ..::.:|   ...:.|||:.|                    |.|      ||..|.|        
Zfish   920 PVVKYDR---NGFKPRQRQLI--------------------LTQ------AAAHLVE-------- 947

  Fly   995 DAKYRQQLEQERRDHELALRLANESNGQVEDSPPVIRNGVNDASPMGP-----NKLISFSQVVSN 1054
            :||.:|:::.      ::|:.|:.||  :.||..::....||....|.     :.|......::.
Zfish   948 EAKIKQRVDY------VSLKGASVSN--LGDSVMILHVAFNDPKQKGDLVLQCDHLFEALTKLAM 1004

  Fly  1055 IASRYLNKSENVRAQQQALGKQKYDLSKWKYSELRDAINTS 1095
            ||    ||..|:...|   |..|:::...|    ::|::.|
Zfish  1005 IA----NKQNNITVVQ---GSIKFEIQAGK----QNAVDFS 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 256/696 (37%)
MYSc_Myo6 71..754 CDD:276833 255/694 (37%)
RILP-like <968..1015 CDD:304877 10/46 (22%)
Myosin-VI_CBD 1160..1246 CDD:293129
myo1haXP_009299653.1 MYSc 43..724 CDD:214580 258/707 (36%)
MYSc_Myo1 62..713 CDD:276829 255/693 (37%)
Myosin_TH1 870..1037 CDD:283635 45/221 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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