DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and MYH8

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_002463.2 Gene:MYH8 / 4626 HGNCID:7578 Length:1937 Species:Homo sapiens


Alignment Length:1296 Identity:369/1296 - (28%)
Similarity:586/1296 - (45%) Gaps:287/1296 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VWVRDAAEGYIQGRI-----------TEIGAKEFEVTPT---DRKYPKRTCHFDDIHSSCDGPQD 58
            |:|.:..|.|::..|           ||.||     |.|   |:.:|.....:|.|         
Human    40 VFVAEPKESYVKSTIQSKEGGKVTVKTEGGA-----TLTVREDQVFPMNPPKYDKI--------- 90

  Fly    59 HDDNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGEL 123
             :|...:..|:|...|.|||.||....||||.....:.||||:.: .:|.|:.:..|.|:...|.
Human    91 -EDMAMMTHLHEPGVLYNLKERYAAWMIYTYSGLFCVTVNPYKWL-PVYKPEVVAAYRGKKRQEA 153

  Fly   124 PPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLC-----------YSHDSAGP 177
            |||:|:|:|.|.:.|...:.:|||:::||||||||.:||.:::|..           .|....|.
Human   154 PPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKKKDESGKMQGT 218

  Fly   178 IETKILDANPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEE 242
            :|.:|:.|||:|||||||||.||:|||||||||.:|:....::....|..|||||||:..|...|
Human   219 LEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLASADIETYLLEKSRVTFQLKAE 283

  Fly   243 RNYHVFYMLLAGAPQQLRDKLSL-GKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLK 306
            |:||:||.:.:.....|.:.|.: ..|.||.::|                          :|.:.
Human   284 RSYHIFYQITSNKKPDLIEMLLITTNPYDYAFVS--------------------------QGEIT 322

  Fly   307 DPIIDDYQHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEE-------IPDDVRGGCQV 364
            .|.|||.:.....|.|:..||.:..||:.||.|..||:|.||:.|::       .||    |.:|
Human   323 VPSIDDQEELMATDSAIDILGFTPEEKVSIYKLTGAVMHYGNMKFKQKQREEQAEPD----GTEV 383

  Fly   365 SEASEQSLTITSGLLGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYS 429
            ::.:....::.|..|      |:.....||........||..:.   ::|   ||..|||||:|.
Human   384 ADKAAYLQSLNSADL------LKALCYPRVKVGNEYVTKGQTVQ---QVY---NAVGALAKAVYE 436

  Fly   430 RLFDRIVGLINQSIPF-QASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQ 493
            ::|..:|..|||.:.. |...::||||||||||.|..||.||.|||:.|||||:|||.::...||
Human   437 KMFLWMVTRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQ 501

  Fly   494 ELYKREGLNVPEITFTD-NQDI---IELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANH 554
            |.||:||:   |.||.| ..|:   ||||| |..|||::|:||...||.:.:.|.   :|.:..|
Human   502 EEYKKEGI---EWTFIDFGMDLAACIELIE-KPLGIFSILEEECMFPKATDTSFK---NKLYDQH 559

  Fly   555 YRLGLPRSSRLKAHRTLRD--EEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLL 617
                |.:|:..:..:.::.  |..|.:.|:||.|.||...:::||.|.|:.::.||.|:.....|
Human   560 ----LGKSANFQKPKVVKGKAEAHFSLIHYAGTVDYNITGWLDKNKDPLNDTVVGLYQKSAMKTL 620

  Fly   618 QTLFPS-----GSSTSVRGK----LNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDR 673
            .:||.:     ..|::.:|.    .:|.:|.:.|:..|.:||..|.....:|:|||.||......
Human   621 ASLFSTYASAEADSSAKKGAKKKGSSFQTVSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPG 685

  Fly   674 QFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADLYSMYK----SVLPPELVSLPARTFCEAMF 734
            ..|..|.|.||:|:|.:..:.:...|:|||:|:.|....||    |.: ||...:.::...|.:.
Human   686 AMEHELVLHQLRCNGVLEGIRICRKGFPSRILYGDFKQRYKVLNASAI-PEGQFIDSKKASEKLL 749

  Fly   735 QSLNLSAKDFKFGITKVFFRPGKFVEFDRIMRSDPENMLAIVAKV----KKWLIRSRWVKSALGA 795
            .|:::....:|||.|||||:.|.....:. ||.  |.:..|:.:.    :.:|:|..:.|     
Human   750 ASIDIDHTQYKFGHTKVFFKAGLLGLLEE-MRD--EKLAQIITRTQAVCRGFLMRVEYQK----- 806

  Fly   796 LCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHRPRYQGIGKINKIRTNTLKTIEIASGLKMGRE 860
                     ::.|.:.:...|...|.|:..| |.|..:...||..:    ||:.|....:...:|
Human   807 ---------MLQRREALFCIQYNVRAFMNVK-HWPWMKLFFKIKPL----LKSAETEKEMATMKE 857

  Fly   861 EIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMYTVVMANMNKL-------------------- 905
            |        :::..|.:.|.:..    ::|::.....::...|.|                    
Human   858 E--------FQKTKDELAKSEAK----RKELEEKMVTLLKEKNDLQLQVQSEADSLADAEERCEQ 910

  Fly   906 ----TVDLNTKLKE-QQQAEEQERL--------RKIQEAL--------EAERAAKEAEEQRQREE 949
                .:.|..|:|| .::|||:|.:        ||:::..        :.|....:.|:::...|
Human   911 LIKNKIQLEAKIKEVTERAEEEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATE 975

  Fly   950 IENKRLKAEM----ETRRKAAEAQRLRQE-----------EEDR-----RAALALQEQ---LEKE 991
            .:.|.|..||    ||..|.::.::..||           |||:     :|...|::|   ||..
Human   976 NKVKNLTEEMAGLDETIAKLSKEKKALQETHQQTLDDLQAEEDKVNILTKAKTKLEQQVDDLEGS 1040

  Fly   992 AKDDAKYRQQLEQERRDHELALRLANESNGQVEDSPPVIRNGVNDASPMG---PNKLISFSQVVS 1053
            .:.:.|.|..||:.:|..|..|:||.||...:|          ||...:.   ..|....|.::|
Human  1041 LEQEKKLRMDLERAKRKLEGDLKLAQESTMDME----------NDKQQLDEKLEKKEFEISNLIS 1095

  Fly  1054 NIAS------RYLNKSENVRAQQQALG--------------KQKYDLSKWKYSELRDAIN----- 1093
            .|..      :...|.:.::|:.:.||              ||:.|||: :..|:.:.:.     
Human  1096 KIEDEQAVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLSR-ELEEISERLEEAGGA 1159

  Fly  1094 TSCDIELLEACRQEFHRRLKVYHAWKAKNRKRTTMDENERAPRSVMEAAFKQPPLVQPIQE 1154
            ||..:||                     |:||..  |.::..|.:.||..:...:|..:::
Human  1160 TSAQVEL---------------------NKKREA--EFQKLRRDLEEATLQHEAMVAALRK 1197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670 14/54 (26%)
MYSc_Myo6 71..754 CDD:276833 253/721 (35%)
CBD_MYO6-like 765..913 CDD:409646 27/175 (15%)
ERM_helical <954..1020 CDD:466641 26/88 (30%)
MYO6_MIU_linker 1002..1093 CDD:480843 26/113 (23%)
MyUb_Myo6 1076..1116 CDD:439319 9/44 (20%)
Myosin-VI_CBD 1160..1246 CDD:465157
MYH8NP_002463.2 Myosin_N 35..79 CDD:460670 12/43 (28%)
MYSc_Myh8 102..769 CDD:276882 253/721 (35%)
Actin-binding 658..680 9/21 (43%)
Actin-binding 760..774 9/13 (69%)
Myosin_tail_1 849..1926 CDD:460256 77/395 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1126..1146 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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