DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and MYO1F

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_011526326.1 Gene:MYO1F / 4542 HGNCID:7600 Length:1119 Species:Homo sapiens


Alignment Length:1101 Identity:317/1101 - (28%)
Similarity:484/1101 - (43%) Gaps:251/1101 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPD-TIKKYNGRSLGEL 123
            ||...|..:.|.....||:.|:..|.|:||:.::||:|||::::.  |..| .|..|.|.:..|.
Human    20 DDMVLLPQITEDAIAANLRKRFMDDYIFTYIGSVLISVNPFKQMP--YFTDREIDLYQGAAQYEN 82

  Fly   124 PPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAG-----PIETKIL 183
            |||::|:.|...|:|.:...:|.:|:|||||||||.:.||::.|:  |..|.|     .::..||
Human    83 PPHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYI--SKVSGGGEKVQHVKDIIL 145

  Fly   184 DANPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVF 248
            .:||:|||||||||.||||||||||:.|:.:....:..||.||::||||||:..|:..|||:|::
Human   146 QSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERNFHIY 210

  Fly   249 YMLLAGAPQQLRDKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDY 313
            |.||.||.|:.|..|.|..||.|.||:                   :|..:|..|      .||.
Human   211 YQLLEGASQEQRQNLGLMTPDYYYYLN-------------------QSDTYQVDG------TDDR 250

  Fly   314 QHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGL 378
            ..|.....|:..:|:..:.:..:..|||.:||||||:|.|      .|......|...|...:.|
Human   251 SDFGETLSAMQVIGIPPSIQQLVLQLVAGILHLGNISFCE------DGNYARVESVDLLAFPAYL 309

  Fly   379 LGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSI 443
            ||:|...|:..|.||.|.|:.|| :...|.|.|.:.:|:..||||||.:|:||||.:|..||:::
Human   310 LGIDSGRLQEKLTSRKMDSRWGG-RSESINVTLNVEQAAYTRDALAKGLYARLFDFLVEAINRAM 373

  Fly   444 PFQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITF 508
            ......:.||||||.|||.|..|.|||||||:.|||||:.|.:..||.|||.|.:||:....|.:
Human   374 QKPQEEYSIGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIQY 438

  Fly   509 TDNQDIIELIEAKSN--GIFTLLD-------------EESKLPKPSYSHFTAEVHKSWANHYRLG 558
            .:|:.:.:|||.|.:  ||.::||             :::.|.|...:..|.|...||:      
Human   439 FNNKVVCDLIENKLSPPGIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHFNSWS------ 497

  Fly   559 LPRSSRLKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPS 623
                            .||::.|:||.|.|:...|.|:|.|.|.:.|..|:|..:...|:.|||.
Human   498 ----------------AGFVIHHYAGKVSYDVSGFCERNRDVLFSDLIELMQTSEQAFLRMLFPE 546

  Fly   624 GSSTSVRGKLNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFE----------GS 678
            ......:|:.:  :.|||.|.|..:|:..|.:...::|||||||.....|.:|          |.
Human   547 KLDGDKKGRPS--TAGSKIKKQANDLVATLMRCTPHYIRCIKPNETKRPRDWEENRTGDSPPRGD 609

  Fly   679 LALA--QLKCSGTISVLELMEHGYPSRVLFADLYSMYKSVLPPELVSLPA--------------- 726
            .|..  |.:..|.|...|....|..||:.           |||.:..:||               
Human   610 SAYPPHQSQAPGGIPGPEGEHQGAQSRLR-----------LPPPVRQIPAEPSALRYAILTPETW 663

  Fly   727 -------RTFCEAMFQSLNLSAKDFKFGITKVF------------FRPGKFVEFDRI-------- 764
                   |...:.:.:::|:....::.|.||||            .|..||..|.|.        
Human   664 PRWRGDERQGVQHLLRAVNMEPDQYQMGSTKVFVKNPESLFLLEEVRERKFDGFARTIQKAWRRH 728

  Fly   765 --------MRSDPENMLAIVAKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARG 821
                    ||.:..|:|....:.::..|...:|...||    ::.|..:              |.
Human   729 VAVRKYEEMREEASNILLNKKERRRNSINRNFVGDYLG----LEERPEL--------------RQ 775

  Fly   822 FLARKQHRPRYQGIGKINK----IRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKM 882
            ||.:::.......:.|.::    |:.:.:.|.:..  ..:|||                  |:|.
Human   776 FLGKRERVDFADSVTKYDRRFKPIKRDLILTPKCV--YVIGRE------------------KVKK 820

  Fly   883 NPRITQREMDSMYTVVMANMNKLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQR 947
            .|...|          :..:.|..||:.. |:....:..|:....:||  :|..:..|:..:.:.
Human   821 GPEKGQ----------VCEVLKKKVDIQA-LRGVSLSTRQDDFFILQE--DAADSFLESVFKTEF 872

  Fly   948 EEIENKRLKAEMETRRKA----AEAQRLRQEEE-------------------------DRRAALA 983
            ..:..||.  |..|||..    ::..:.|.::|                         .|...::
Human   873 VSLLCKRF--EEATRRPLPLTFSDTLQFRVKKEGWGGGGTRSVTFSRGFGDLAVLKVGGRTLTVS 935

  Fly   984 LQEQLEKEAKDDAKYRQQLEQERRDHELALRLANESNGQVEDSPP--VIRNGVNDASPMGP 1042
            :.:.|.|.:|...|...: .:.||..:...|.|        .:||  :.||||..::..||
Human   936 VGDGLPKSSKPTRKGMAK-GKPRRSSQAPTRAA--------PAPPRGMDRNGVPPSARGGP 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 256/760 (34%)
MYSc_Myo6 71..754 CDD:276833 252/749 (34%)
RILP-like <968..1015 CDD:304877 9/71 (13%)
Myosin-VI_CBD 1160..1246 CDD:293129
MYO1FXP_011526326.1 MYSc 12..711 CDD:214580 256/761 (34%)
MYSc_Myo1 31..698 CDD:276829 252/737 (34%)
Myosin_TH1 738..918 CDD:283635 38/232 (16%)
SH3_MyoIe_If_like 1066..1118 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.