DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and myo6b

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001004110.1 Gene:myo6b / 445472 ZFINID:ZDB-GENE-030318-3 Length:1267 Species:Danio rerio


Alignment Length:1289 Identity:675/1289 - (52%)
Similarity:889/1289 - (68%) Gaps:54/1289 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LEDTQLVWVRDAAEGYIQGRITEIGAKEFEVTPTDRKYPKRTCHFDDIHSSCDGPQDH-DDNCEL 65
            ::|.:|||.....:|:..|.|.:|||....:.|..::..........:..:.|....| :|||.|
Zfish     1 MDDGKLVWAPHPTDGFQLGMIVDIGADALTIEPLHQRGKTFLAPISQVFPAEDDVNKHVEDNCSL 65

  Fly    66 MLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAI 130
            |.|||||.|:|::.||.||.|||:|||||||||||.:|.:||:|::||.|.|||||.|||||:||
Zfish    66 MYLNEATLLNNIRIRYSKDMIYTFVANILIAVNPYFDIPKLYSPESIKSYQGRSLGTLPPHVYAI 130

  Fly   131 ADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIETKILDANPVLEAFGNA 195
            ||||.|||||.|:||||||||||||||||:||::|:||..|:.:...|:.:|::|||:|||||||
Zfish   131 ADKAYRDMRVLKMSQSIIVSGESGAGKTENTKFVLRYLTTSYGTGQDIDERIVEANPLLEAFGNA 195

  Fly   196 KTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLR 260
            ||.|||||||||||:|:|::.|..||||::|||||||||||.||.||||||:||.|.|||.:.:|
Zfish   196 KTVRNNNSSRFGKFVEIHFNEKNAVVGGFVSHYLLEKSRICMQSQEERNYHIFYRLCAGASEDIR 260

  Fly   261 DKLSLGKPDDYRYLS-GCTQYFANAKTEQLIPGSQKS---KNHQQKGPLKDPIIDDYQHFHNLDK 321
            :.|.|..||.:|||: |||:||||..:::.|..: ||   ..|.:.|.||||::||...|:.:..
Zfish   261 NMLHLNSPDSFRYLNRGCTRYFANKDSDKQIMQNXKSPEDHKHGKVGALKDPLLDDLGDFNRMVV 325

  Fly   322 ALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLLGVDQTEL 386
            |:.::||.|||||.::.:||.|||||||.||| .....|||.:...|.|:|...:.|||:||.:|
Zfish   326 AMKKIGLDDTEKLNLFRVVAGVLHLGNIDFEE-TGSTSGGCILKNQSSQTLEYCADLLGLDQDDL 389

  Fly   387 RTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQASNFY 451
            |.:|.:|||.:..||.|||||.||||:.:|:|||||||||:||||||.:|..:||..||..|:.:
Zfish   390 RVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKAVYSRLFDHVVKRVNQCFPFDTSSNF 454

  Fly   452 IGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDIIE 516
            |||.||||||||..||||||||||||||||:|||:.|||.|||||:||||.|.|:.:.||||.|:
Zfish   455 IGVPDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCID 519

  Fly   517 LIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLKAHRTLRDEEGFLVRH 581
            |:|||..|:..:||||::||:||..||...||....:|:||.:||.|:|..||.|||:|||::||
Zfish   520 LVEAKLVGVLDILDEENRLPQPSDQHFAEAVHSKHKDHFRLTVPRKSKLTIHRNLRDDEGFIIRH 584

  Fly   582 FAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGS----STSVRGKLNFISVGSKF 642
            |||||||.|.||:||||||||.|||.||.|..:..::.||.:.|    |....|||:|||||:||
Zfish   585 FAGAVCYETTQFVEKNNDALHMSLESLVCESKDKFVRDLFENNSNSKDSKQKAGKLSFISVGNKF 649

  Fly   643 KTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFA 707
            ||||..|:|||...|::||||:|||.||:..||||:..|:||:|||.:|||:||:.|:|||..|.
Zfish   650 KTQLNLLLEKLRSTGSSFIRCVKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRAPFH 714

  Fly   708 DLYSMYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFVEFDRIMRSDPENM 772
            :||:|||..:|.:|..|..|.||:|:|::|.|:..|:|||:|:||||||||.|||:||:|||:::
Zfish   715 ELYNMYKQYMPNKLTRLDPRLFCKALFKALGLNENDYKFGLTRVFFRPGKFAEFDQIMKSDPDHL 779

  Fly   773 LAIVAKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHRPRYQGIGK 837
            ..:|.:|.|||:.|||.|.....|.||||||::.||....:..|:..|.:|.|::|:||..|:.|
Zfish   780 AELVKRVNKWLVCSRWKKVQWCTLSVIKLRNKMSYRASACIRIQKTVRMWLCRRRHKPRVDGLVK 844

  Fly   838 INKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMYTVVMANM 902
            :..:|....:..|..:|||.|:.|:...:.::....|..:.|||... ::::|::..|..::...
Zfish   845 VKNLRKRMERFNEAVNGLKEGKAEMSKQIEELAASTDALMAKIKTTV-MSRKEIEQEYEGLVKRS 908

  Fly   903 NKLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIENKRLKAEMETRRKAAE 967
            .:|   |::..|::|:.||.|||:.|||.:|.||...|.|||.:::|.|::|:|:|||.:||..|
Zfish   909 EQL---LSSMQKKKQEQEETERLKHIQEZMEKERKRHEEEEQLRKQEEEDRRMKSEMEQKRKQEE 970

  Fly   968 AQRLRQEEEDRRAALALQEQLEKEAKDDAKYRQQLEQERRDHELALRLANESNGQVEDS---PPV 1029
            .:|.::|||:|.....|:.||..:.:::.:.:..|||||||.|||:|:|......::|.   .|:
Zfish   971 EERKKREEEERVLQAELEMQLALDREEETQRQTILEQERRDRELAMRIAQNEAELIQDEAQMDPI 1035

  Fly  1030 IR----NGVNDASPMGPNKLISFSQVVSNIASRYLNKSENVRAQQQALGKQKYDLSKWKYSELRD 1090
            :|    .||...:.||                      ..|:|.:.|.|.:|||||||||:||||
Zfish  1036 LRRDATTGVWFFTEMG----------------------AQVQANKVAAGVKKYDLSKWKYAELRD 1078

  Fly  1091 AINTSCDIELLEACRQEFHRRLKVYHAWKAKNRKRTTMDENERAPRSVMEAAFKQ--PPLVQPIQ 1153
            |||||||||||.|||:|||||||||||||:||:||.| |...|||:||.:.|.:.  ||:....|
Zfish  1079 AINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNT-DTEMRAPKSVTDYAQQNPAPPVPARQQ 1142

  Fly  1154 EI-VTAQHRYFRIPFMRA----NAPDNTKRGLWYAHFDGQWIARQMELHADKPPILLVAGTDDMQ 1213
            || :..|.|||||||:|.    ..|.|.|:|.|||||||.|||||||||.||.|||||||.|||:
Zfish  1143 EIAMNRQQRYFRIPFIRPADQYKDPQNKKKGWWYAHFDGPWIARQMELHPDKQPILLVAGKDDME 1207

  Fly  1214 MCELSLEETGLTRKRGAEILEHEFNREWERNGGKAY-KNLGAAKPNGP--AAAM 1264
            ||||||||||||||||||||..:|...|||.||..| ||...:|...|  |.||
Zfish  1208 MCELSLEETGLTRKRGAEILPRQFEEIWERCGGIQYLKNAIESKQARPTYATAM 1261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832 10/37 (27%)
Myosin_head 59..754 CDD:278492 417/703 (59%)
MYSc_Myo6 71..754 CDD:276833 408/690 (59%)
RILP-like <968..1015 CDD:304877 18/46 (39%)
Myosin-VI_CBD 1160..1246 CDD:293129 64/89 (72%)
myo6bNP_001004110.1 MYSc 59..773 CDD:214580 426/714 (60%)
MYSc_Myo6 71..761 CDD:276833 408/690 (59%)
Ax_dynein_light <847..930 CDD:287215 22/86 (26%)
Myosin-VI_CBD 1150..1240 CDD:293129 64/89 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579238
Domainoid 1 1.000 853 1.000 Domainoid score I56
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56417
Inparanoid 1 1.050 1296 1.000 Inparanoid score I155
OMA 1 1.010 - - QHG59165
OrthoDB 1 1.010 - - D112896at33208
OrthoFinder 1 1.000 - - FOG0005395
OrthoInspector 1 1.000 - - otm25336
orthoMCL 1 0.900 - - OOG6_105053
Panther 1 1.100 - - LDO PTHR13140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4674
SonicParanoid 1 1.000 - - X3827
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.900

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