DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and MYO1B

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_047300366.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1156 Species:Homo sapiens


Alignment Length:1183 Identity:350/1183 - (29%)
Similarity:563/1183 - (47%) Gaps:182/1183 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIAD 132
            |||.||::|||.|:...:||||:.:::|:|||||.: .:|:|:.:::|..|:..||.||:||::|
Human    46 LNEETFINNLKKRFDHSEIYTYIGSVVISVNPYRSL-PIYSPEKVEEYRNRNFYELSPHIFALSD 109

  Fly   133 KAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKY---LCYSHDSAGPIETKILDANPVLEAFGN 194
            :|.|.:|.....|.|:::|||||||||::|.::.|   :|........::.::|.:|||||||||
Human   110 EAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGN 174

  Fly   195 AKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQL 259
            |||.||:|||||||::::.:|.|...:||.||:|||||||:..|...|||:||||.||:||.::|
Human   175 AKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEEL 239

  Fly   260 RDKLSLGKP-DDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKAL 323
            .:||.|.:. ..|.|||     ..:||...                     :||..:|..:..|:
Human   240 LNKLKLERDFSRYNYLS-----LDSAKVNG---------------------VDDAANFRTVRNAM 278

  Fly   324 GRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQS-LTITSGLLGVDQTELR 387
            ..:|..|.|...:.::|||||.||||.|:  |:....|...|:..::: |.....|.|:||:.|.
Human   279 QIVGFMDHEAESVLAVVAAVLKLGNIEFK--PESRVNGLDESKIKDKNELKEICELTGIDQSVLE 341

  Fly   388 TALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQAS--NF 450
            .|...|.:::     |...:...|.:.:|..|||||||.:|||||..:|..||:||..|..  ..
Human   342 RAFSFRTVEA-----KQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKK 401

  Fly   451 YIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDII 515
            .:|||||.|||.|..||||||.|||||||||:.|.:..||.|||.|.||.:....|.:.:|..|.
Human   402 VMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIIC 466

  Fly   516 ELIEAKSNGIFTLLDEESKLP-KPSYSHFTAEVHKSWANHYRLGLPRSSRL-KAHRTLRD----E 574
            :|||..:|||..:||||...| ..:...|..::::..|.|...    .||: |..|.|.|    .
Human   467 DLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHF----ESRMSKCSRFLNDTSLPH 527

  Fly   575 EGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNF---I 636
            ..|.::|:||.|.|..|.|::||||.|:..|...:.:..:.|:::|||.|:.    .|:|.   .
Human   528 SCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKASHALIKSLFPEGNP----AKINLKRPP 588

  Fly   637 SVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYP 701
            :.||:||..:..||:.|:....|:|||||||.|.....|..:|...|::..|.:..:.:...||.
Human   589 TAGSQFKASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFNEALVCHQIRYLGLLENVRVRRAGYA 653

  Fly   702 SRVLFADLYSMYKSVLP---PELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFR-PGKFVEFD 762
            .|..:......||.:..   |.... |||:..|.:|..|.:..:::.||.:|:|.| |....:.:
Human   654 FRQAYEPCLERYKMLCKQTWPHWKG-PARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFKLE 717

  Fly   763 RIMRSDPENMLAIVAKV-KKWLIRSRWVKSALGALCVIKLRNRIIYRNK------CVLIAQRIAR 820
            .:.:...|::..::.|: :.|..|:.::......:.:.....|...:.:      ..|:.|...|
Human   718 DLRKQRLEDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWYRRYAQQKRYQQTKSSALVIQSYIR 782

  Fly   821 GFLARK-----QHRPR-----------YQGIGKINKIR------------------------TNT 845
            |:.|||     :|:.|           :.|.....::|                        ...
Human   783 GWKARKILRELKHQKRCKEAVTTIAAYWHGTQARRELRRLKEEARNKHAIAVIWAYWLGSKARRE 847

  Fly   846 LKTIEIAS--------------GLKMGREEIISGVNDIYRQI--DDAIKKIKMNPRITQREMDSM 894
            ||.::..:              |||:.||         ||:.  .:|.|||.   ..|.:.:...
Human   848 LKRLKEEARRKHAVAVIWAYWLGLKVRRE---------YRKFFRANAGKKIY---EFTLQRIVQK 900

  Fly   895 YTVVMAN-MNKLT-VDLN-------------TKLKE----------QQQAEEQERLRKIQEALEA 934
            |.:.|.| |..|: :|.|             .:||.          :.|..:|::| ..:|.|||
Human   901 YFLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKL-IYEEKLEA 964

  Fly   935 ERAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRRAALALQEQLEKEAKDDAKYR 999
            ....|: ::......:......|.:|. .|..:.::|:...|::   :.:.|.:.|..:.:.|..
Human   965 SELFKD-KKALYPSSVGQPFQGAYLEI-NKNPKYKKLKDAIEEK---IIIAEVVNKINRANGKST 1024

  Fly  1000 QQLEQERRDHELALRLANESNGQVEDSPPVIRNGVNDASPMGPNKLISFSQVVSNIASRYLNKSE 1064
            .::.....::   |.||::.:||::...|::  .|...|....|.  .|..|.....|...:|.:
Human  1025 SRIFLLTNNN---LLLADQKSGQIKSEVPLV--DVTKVSMSSQND--GFFAVHLKEGSEAASKGD 1082

  Fly  1065 NVRAQQQALGKQKYDLSKWKYSELRDAINTSCDIELLEACRQEFHRRLKVYHAWKAKNRKRTTMD 1129
            .:.:....: :....|.:...|:.:..:|.....|.|...||:     ||...:...|:|..::.
Human  1083 FLFSSDHLI-EMATKLYRTTLSQTKQKLNIEISDEFLVQFRQD-----KVCVKFIQGNQKNGSVP 1141

  Fly  1130 ENERAPRSVMEAA 1142
            ..:|....::|.|
Human  1142 TCKRKNNRLLEVA 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670
MYSc_Myo6 71..754 CDD:276833 263/701 (38%)
CBD_MYO6-like 765..913 CDD:409646 37/225 (16%)
ERM_helical <954..1020 CDD:466641 11/65 (17%)
MYO6_MIU_linker 1002..1093 CDD:480843 15/90 (17%)
MyUb_Myo6 1076..1116 CDD:439319 9/39 (23%)
Myosin-VI_CBD 1160..1246 CDD:465157
MYO1BXP_047300366.1 MYSc_Myo1 49..708 CDD:276829 263/701 (38%)
IQ 769..791 CDD:197470 7/21 (33%)
Myosin_TH1 961..1138 CDD:461801 36/194 (19%)
Blue background indicates that the domain is not in the aligned region.

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