DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and MYO1B

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001123630.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1136 Species:Homo sapiens


Alignment Length:1183 Identity:350/1183 - (29%)
Similarity:563/1183 - (47%) Gaps:182/1183 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIAD 132
            |||.||::|||.|:...:||||:.:::|:|||||.: .:|:|:.:::|..|:..||.||:||::|
Human    26 LNEETFINNLKKRFDHSEIYTYIGSVVISVNPYRSL-PIYSPEKVEEYRNRNFYELSPHIFALSD 89

  Fly   133 KAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKY---LCYSHDSAGPIETKILDANPVLEAFGN 194
            :|.|.:|.....|.|:::|||||||||::|.::.|   :|........::.::|.:|||||||||
Human    90 EAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGN 154

  Fly   195 AKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQL 259
            |||.||:|||||||::::.:|.|...:||.||:|||||||:..|...|||:||||.||:||.::|
Human   155 AKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEEL 219

  Fly   260 RDKLSLGKP-DDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKAL 323
            .:||.|.:. ..|.|||     ..:||...                     :||..:|..:..|:
Human   220 LNKLKLERDFSRYNYLS-----LDSAKVNG---------------------VDDAANFRTVRNAM 258

  Fly   324 GRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQS-LTITSGLLGVDQTELR 387
            ..:|..|.|...:.::|||||.||||.|:  |:....|...|:..::: |.....|.|:||:.|.
Human   259 QIVGFMDHEAESVLAVVAAVLKLGNIEFK--PESRVNGLDESKIKDKNELKEICELTGIDQSVLE 321

  Fly   388 TALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQAS--NF 450
            .|...|.:::     |...:...|.:.:|..|||||||.:|||||..:|..||:||..|..  ..
Human   322 RAFSFRTVEA-----KQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKK 381

  Fly   451 YIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDII 515
            .:|||||.|||.|..||||||.|||||||||:.|.:..||.|||.|.||.:....|.:.:|..|.
Human   382 VMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIIC 446

  Fly   516 ELIEAKSNGIFTLLDEESKLP-KPSYSHFTAEVHKSWANHYRLGLPRSSRL-KAHRTLRD----E 574
            :|||..:|||..:||||...| ..:...|..::::..|.|...    .||: |..|.|.|    .
Human   447 DLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHF----ESRMSKCSRFLNDTSLPH 507

  Fly   575 EGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNF---I 636
            ..|.::|:||.|.|..|.|::||||.|:..|...:.:..:.|:::|||.|:.    .|:|.   .
Human   508 SCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKASHALIKSLFPEGNP----AKINLKRPP 568

  Fly   637 SVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYP 701
            :.||:||..:..||:.|:....|:|||||||.|.....|..:|...|::..|.:..:.:...||.
Human   569 TAGSQFKASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFNEALVCHQIRYLGLLENVRVRRAGYA 633

  Fly   702 SRVLFADLYSMYKSVLP---PELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFR-PGKFVEFD 762
            .|..:......||.:..   |.... |||:..|.:|..|.:..:::.||.:|:|.| |....:.:
Human   634 FRQAYEPCLERYKMLCKQTWPHWKG-PARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFKLE 697

  Fly   763 RIMRSDPENMLAIVAKV-KKWLIRSRWVKSALGALCVIKLRNRIIYRNK------CVLIAQRIAR 820
            .:.:...|::..::.|: :.|..|:.::......:.:.....|...:.:      ..|:.|...|
Human   698 DLRKQRLEDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWYRRYAQQKRYQQTKSSALVIQSYIR 762

  Fly   821 GFLARK-----QHRPR-----------YQGIGKINKIR------------------------TNT 845
            |:.|||     :|:.|           :.|.....::|                        ...
Human   763 GWKARKILRELKHQKRCKEAVTTIAAYWHGTQARRELRRLKEEARNKHAIAVIWAYWLGSKARRE 827

  Fly   846 LKTIEIAS--------------GLKMGREEIISGVNDIYRQI--DDAIKKIKMNPRITQREMDSM 894
            ||.::..:              |||:.||         ||:.  .:|.|||.   ..|.:.:...
Human   828 LKRLKEEARRKHAVAVIWAYWLGLKVRRE---------YRKFFRANAGKKIY---EFTLQRIVQK 880

  Fly   895 YTVVMAN-MNKLT-VDLN-------------TKLKE----------QQQAEEQERLRKIQEALEA 934
            |.:.|.| |..|: :|.|             .:||.          :.|..:|::| ..:|.|||
Human   881 YFLEMKNKMPSLSPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKL-IYEEKLEA 944

  Fly   935 ERAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRRAALALQEQLEKEAKDDAKYR 999
            ....|: ::......:......|.:|. .|..:.::|:...|::   :.:.|.:.|..:.:.|..
Human   945 SELFKD-KKALYPSSVGQPFQGAYLEI-NKNPKYKKLKDAIEEK---IIIAEVVNKINRANGKST 1004

  Fly  1000 QQLEQERRDHELALRLANESNGQVEDSPPVIRNGVNDASPMGPNKLISFSQVVSNIASRYLNKSE 1064
            .::.....::   |.||::.:||::...|::  .|...|....|.  .|..|.....|...:|.:
Human  1005 SRIFLLTNNN---LLLADQKSGQIKSEVPLV--DVTKVSMSSQND--GFFAVHLKEGSEAASKGD 1062

  Fly  1065 NVRAQQQALGKQKYDLSKWKYSELRDAINTSCDIELLEACRQEFHRRLKVYHAWKAKNRKRTTMD 1129
            .:.:....: :....|.:...|:.:..:|.....|.|...||:     ||...:...|:|..::.
Human  1063 FLFSSDHLI-EMATKLYRTTLSQTKQKLNIEISDEFLVQFRQD-----KVCVKFIQGNQKNGSVP 1121

  Fly  1130 ENERAPRSVMEAA 1142
            ..:|....::|.|
Human  1122 TCKRKNNRLLEVA 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 266/704 (38%)
MYSc_Myo6 71..754 CDD:276833 263/701 (38%)
RILP-like <968..1015 CDD:304877 6/46 (13%)
Myosin-VI_CBD 1160..1246 CDD:293129
MYO1BNP_001123630.1 MYSc_Myo1 29..688 CDD:276829 263/701 (38%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 578..600 10/21 (48%)
IQ 749..771 CDD:197470 7/21 (33%)
Myosin_TH1 941..1118 CDD:399188 36/194 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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