DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and Myo61F

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_476934.2 Gene:Myo61F / 38153 FlyBaseID:FBgn0010246 Length:1052 Species:Drosophila melanogaster


Alignment Length:890 Identity:288/890 - (32%)
Similarity:453/890 - (50%) Gaps:100/890 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADK 133
            :|..|:.|||.|:.:|.||||:..:||:||||::: .:|..|.:|.|..:...|:|||:||:.|.
  Fly    50 SEEAFIGNLKKRFQEDLIYTYIGQVLISVNPYKQL-PIYTDDHVKAYRNKHFYEMPPHIFAVTDN 113

  Fly   134 AIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIE---TKILDANPVLEAFGNA 195
            |.|.:......|.:::|||||:||||::|.:|:::.....:...:|   .|:|.:||||||||||
  Fly   114 AFRSLIEENRGQCVLISGESGSGKTEASKKVLQFIAACSGNQTTVEGVKDKLLKSNPVLEAFGNA 178

  Fly   196 KTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLR 260
            ||.||:|||||||::::.:|.|...:||.|.:|||||||:..|...|||:|:||.|||||.:.|.
  Fly   179 KTNRNDNSSRFGKYMDIQFDFKGAPIGGNILNYLLEKSRVVAQMGGERNFHIFYQLLAGADEALL 243

  Fly   261 DKLSLGKP-DDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALG 324
            .:|.|.:. |.|.||   |.......|.                      |:|...|..:.:||.
  Fly   244 QELRLERALDTYSYL---TDGLNGTVTR----------------------INDADSFKQVQQALT 283

  Fly   325 RLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSG-LLGVDQTELRT 388
            .:..:..|:..|:.:||::|||||:.|.|    |.|..:|   :.:.|.:|:. ||||:.:||..
  Fly   284 VIDFTKEEQREIFGIVASILHLGNVGFTE----VEGNAKV---NSRDLVVTAARLLGVNASELEA 341

  Fly   389 ALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQ----ASN 449
            ||..|.:.:     :|.|:..||....|..||||||||:|.|||..:|..:|.|:..:    :.|
  Fly   342 ALTHRTIDA-----RGDVVTSPLNQELAIYARDALAKAVYDRLFSWLVQRLNISLQAKETRASRN 401

  Fly   450 FYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDI 514
            ..:|:|||.|||.|..|||||||||:||||||:.|.:..||:||:.|:|||:....:.:.||:.|
  Fly   402 NVMGILDIYGFEIFQKNSFEQFCINFCNEKLQQLFIELTLKSEQDEYRREGIEWIPVEYFDNKVI 466

  Fly   515 IELIEAKSNGIFTLLDEESKLP-KPSYSHFTAEVHKSWANHYRLGLPRSSRLKAH---RTLRDEE 575
            ..|||.|..||.::||||...| :|:...|..::.:..|.|:....  ..:..||   ..|||| 
  Fly   467 CNLIEEKHKGIISILDEECLRPGEPTDKTFLEKLTQKLAQHHHYVC--HEKAPAHIKKIMLRDE- 528

  Fly   576 GFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNFISVGS 640
             |.:.|:||.|.|:...|::||||.|...|:..:.:..|.:::..||.....|::.....|   :
  Fly   529 -FRLVHYAGEVTYSVNGFLDKNNDLLFRDLKETLSKAGNGIVRNCFPEKELRSLKRPETAI---T 589

  Fly   641 KFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSR-- 703
            :|:..|..||:.|.....::|||||||.......|...|.|.|:|..|.:..|.:...|:..|  
  Fly   590 QFRASLNNLMDILMCKEPSYIRCIKPNDLQTANVFNDELVLHQVKYLGLMENLRVRRAGFAYRRT 654

  Fly   704 -VLFADLY-SMYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFR-PGKFVEFDRIM 765
             .||.:.| |:.||..|........:...:.:.:.|....:.::.|.||:|.| |....:.:...
  Fly   655 YELFLERYKSLSKSTWPNYKGPGGPKAGVQQLVKDLGWDEEKYRVGETKLFIRWPRTLFDTEDAY 719

  Fly   766 RSDPENMLAIVAKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHRP 830
            :.....:.||        |::.| |..:.....:|||.::|       |.|...|..||::..:.
  Fly   720 QEKKHEIAAI--------IQAHW-KGLMQRRKYLKLRAQVI-------IMQSYCRRKLAQQAAKK 768

  Fly   831 RYQGIGKINKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMY 895
            |.:...||.......:...:..:|.   .||.|:....::        .:::...:..:.:|..:
  Fly   769 RREAADKIRAFIKGFITRNDAPNGF---NEEFIANAKRMW--------LLRLAKELPTKVLDKSW 822

  Fly   896 ----------TVVMANMNKLTVDLNTKLKEQQQAEEQERLRKIQE 930
                      :.::..:::|.:....:||...|.:.|..|:.:.|
  Fly   823 PHAPGHCEEASGILHRLHRLHLARIYRLKLTPQQKRQFELKVLAE 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 257/701 (37%)
MYSc_Myo6 71..754 CDD:276833 256/699 (37%)
RILP-like <968..1015 CDD:304877
Myosin-VI_CBD 1160..1246 CDD:293129
Myo61FNP_476934.2 MYSc 32..720 CDD:214580 259/714 (36%)
MYSc_Myo1 52..707 CDD:276829 256/699 (37%)
Myosin_TH1 863..1035 CDD:283635 1/5 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466298
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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