DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and didum

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster


Alignment Length:1466 Identity:396/1466 - (27%)
Similarity:640/1466 - (43%) Gaps:383/1466 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDNCELMLLNEATFLDNLKTRYYKDK-IYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGEL 123
            :|...|..|:|...|.||:.|:.:.: ||||...||:|:|||.|: .||.|..|:.|.|.::|:|
  Fly    73 NDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEM-PLYGPSIIRAYRGHAMGDL 136

  Fly   124 PPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCY--SHDSAGPIETKILDAN 186
            .||:||:|::|...:.....:.|||||||||||||.|.||.::|...  ..:|...:|.|:|.::
  Fly   137 EPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVERKVLASS 201

  Fly   187 PVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVV---GGYISHYLLEKSRICTQSAEERNYHVF 248
            |::|||||||||||:||||||||.::.:..:..|:   |..:..|||||||:..|:..|||||:|
  Fly   202 PIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHIF 266

  Fly   249 YMLLAGAPQQLRDKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDY 313
            |.|.|...:.  .:|.|...|.:::|:              :.|:.:.:.           :.|.
  Fly   267 YQLCAARSKY--PELVLDHQDKFQFLN--------------MGGAPEIER-----------VSDA 304

  Fly   314 QHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQS------- 371
            :.|:...:|:..||.|..:...|..::|.:||||||...:         :.:|.||:.       
  Fly   305 EQFNETVQAMTVLGFSIQQIADIVKILAGILHLGNIQVSK---------KFNEGSEEEDSDSCDI 360

  Fly   372 ------LTITSGLLGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSR 430
                  |.||:.||.|...:||..|:.|.::|     ....:::|..|..|..|||||||.||::
  Fly   361 FHNDIHLQITADLLRVSADDLRRWLLMRKIES-----VNEYVLIPNSIEAAQAARDALAKHIYAK 420

  Fly   431 LFDRIVGLINQSI---PFQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNE 492
            ||..|||::|:|:   ..|.|  :||||||.|||.|.|||||||||||.|||||:.||.::.|.|
  Fly   421 LFQYIVGVLNKSLNNGSKQCS--FIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLE 483

  Fly   493 QELYKREGLNVPEITFTDNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRL 557
            ||.|.:||:....|.|.|||..|:|||::. |:..|||||.::||.|        .:|||... :
  Fly   484 QEEYLKEGITWTMIDFYDNQPCIDLIESRL-GVLDLLDEECRMPKGS--------DESWAGKL-I 538

  Fly   558 G----LPRSSRLKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPL-- 616
            |    .|...:.:...|     .|.::||:..|.|:...|:|||.|.:...|..::.|.:..|  
  Fly   539 GKCNKFPHFEKPRFGTT-----SFFIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESNMSLAK 598

  Fly   617 -------LQTLFPSGSSTSVRGKLNFIS-----------------------VGSKFKTQLGELME 651
                   :.||....:.:|..|....||                       |||:|:..|..|:.
  Fly   599 QVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVPSKQHRKTVGSQFQESLASLIS 663

  Fly   652 KLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADLYS----- 711
            .|.....:::||||||...:..::|.:..:.||:..|.:..:.:...|:|||.|:.|.|.     
  Fly   664 TLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLL 728

  Fly   712 MYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFVEFDRIMRSDPENMLAIV 776
            :|:|.|....:.|..|.......|    ....::||.|::|||.|:....:::..:..:..:.||
  Fly   729 VYRSKLDKNDMKLSCRNIVMKWIQ----DEDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYITIV 789

  Fly   777 -AKVKKWLIRSRWV-----------------------------------KSALGALC---VIKLR 802
             :.|::::.|.:::                                   |.|.|.||   .::||
  Fly   790 QSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLR 854

  Fly   803 NRI----------IYRNK---------CVLIAQRIARGFLARKQHRPRYQGI------------- 835
            :.|          :.|||         .|.| ||..||.|||:.::.|.:.|             
  Fly   855 HSISGIQTYARGMLARNKFHAMRDHYRAVQI-QRFVRGALARRAYQKRRRNIIICQAAIRRFLAR 918

  Fly   836 GKINKIRTNTLKTIEIASGLKMGRE-EIISGVNDIYRQIDD---------------AIKKIKMNP 884
            .|..:::... |||.......||.| :|||    :.::||:               ::.|:|:. 
  Fly   919 RKFKRMKAEA-KTISHMENKYMGLENKIIS----MQQRIDELNRDNSNLKHKTSEISVLKMKLE- 977

  Fly   885 RITQREMDSMYTVVMA---NMNKLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQ 946
              .::.:::.:..|.|   :.:||...||    :|.:||..|:::.::|...|:   :|...|:|
  Fly   978 --LKKTLEAEFKNVKAACQDKDKLIEALN----KQLEAERDEKMQLLEENGHAQ---EEWISQKQ 1033

  Fly   947 REEIENKRLKAEME---TRRKAAEAQRLRQEE------EDRRAALALQEQL-EKEAKDDAKYRQQ 1001
            ....||:.|:.:::   ...|.||..:..||:      ::|....|.|..: :||..::..:..:
  Fly  1034 TWRQENEELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENFMLK 1098

  Fly  1002 LEQER---RDHELALRLANESNGQVEDS--------------PPVIRN---GVNDASPM------ 1040
            .|..|   ....|..|.|:.::.|.||.              ||.:.:   ..||::.:      
  Fly  1099 EELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYNDSTSLVVKLRS 1163

  Fly  1041 ------GPNKLISFSQVVSNIASRYLNKSENVRAQQQALGKQKYDLSKWKYSELRDAINTSCDIE 1099
                  ..:|::....:  .::||:....::.|..:..:..:|.   :.:|.:||.:|....:|.
  Fly  1164 ILEEEKQKHKVLQEQYI--KLSSRHKPTEDSFRVSELEVENEKL---RSEYDQLRTSIKHGVEIN 1223

  Fly  1100 LLE----ACRQEFHRR------------------------------------LKVYHAWKAKNR- 1123
            .|.    |.::|..||                                    ::.:|:.|..|| 
  Fly  1224 ELNAQHAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPESLQMRGNDVNELMEAFHSQKLINRQ 1288

  Fly  1124 -----KRTTMDENERAPRSVMEAAFKQPPLVQPIQEIVTAQHRYFRIPFMRANAPDNTKRGLWYA 1183
                 |..|.:.|.:              ||:..|||            .|.|   |.|..|...
  Fly  1289 LESELKAITEEHNSK--------------LVEMTQEI------------ERLN---NEKDELQKV 1324

  Fly  1184 HFDG----------------QWIARQMELHADKPPILLVAGTDDMQMCELSLEETGLTRKRGAEI 1232
            .|:.                :::.|  ||.......|||  .:::::....|:   ..|:.|.: 
  Fly  1325 MFESIDEFEDSNVDTLRQNDRYLRR--ELQKAVAQFLLV--QEELKLANAKLK---AYRQDGGQ- 1381

  Fly  1233 LEHEFNREWERNGGKAYKNLGAAKPNGPAAAMQKQQ 1268
            |||:...|..||     |:.|.:...|.....||.|
  Fly  1382 LEHKIEEEMIRN-----KSNGTSADVGANVTKQKSQ 1412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 259/756 (34%)
MYSc_Myo6 71..754 CDD:276833 255/745 (34%)
RILP-like <968..1015 CDD:304877 10/56 (18%)
Myosin-VI_CBD 1160..1246 CDD:293129 21/101 (21%)
didumNP_724569.1 MYSc 65..778 CDD:214580 262/767 (34%)
MYSc_Myo5 84..767 CDD:276831 255/745 (34%)
IQ 900..922 CDD:197470 3/21 (14%)
GBP_C <971..1086 CDD:303769 28/124 (23%)
coiled coil 1049..1068 CDD:293879 5/18 (28%)
coiled coil 1077..1086 CDD:293879 2/8 (25%)
JAKMIP_CC3 <1190..1299 CDD:292653 18/111 (16%)
Myo5_CBD 1424..1792 CDD:271254
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466257
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1389at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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