DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and CG31638

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_723186.2 Gene:CG31638 / 33910 FlyBaseID:FBgn0051638 Length:704 Species:Drosophila melanogaster


Alignment Length:496 Identity:104/496 - (20%)
Similarity:191/496 - (38%) Gaps:111/496 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   838 INKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDS--------M 894
            :.||....|:..|....|:..|:|.:    ::::.|:....:|: :.|..|.||.|        :
  Fly   236 LQKISMLQLRLDEAQKTLQAERDEKL----ELHKSIEKLTLEIQ-DVRGRQEEMRSAKQEAVREL 295

  Fly   895 YTVVMANMNKLTVDLNTKLKEQQQAEE--QERLRKIQEALEAERAAKEAEEQRQREEIENKRLKA 957
            .|:...:..::.: :|..|:|:..|.|  :.||.:::..|| ...|:.|.|..:||.:|:::|..
  Fly   296 LTLQEQHRAEMRI-VNNSLQEEIAARENLERRLTELRTELE-HLQAENASEWGKRERLESEKLAM 358

  Fly   958 EMETRRKAAEAQRLRQEEEDRRA---------ALALQEQLEKEAKD-------DAKYRQQLEQER 1006
            |.:.::..||. |..||..||:.         ..|||::|.:..|:       .||.::.|.:..
  Fly   359 ERDNKKLRAEL-RDYQERSDRKCRPMQANDVELRALQQELSERNKEISEVKMSHAKLKKLLAETN 422

  Fly  1007 RDHELALRLANESNGQVEDSPPVIRN------GVNDASPMGPNKLISFSQVVSNIASRYLNKSEN 1065
            .:...|:|.|.:...:|:.....:..      |..|......|::....:  ||  ...:.::|.
  Fly   423 TELGHAVRRAEQYEAEVKRLRQRVEELKRELAGAEDELDSAVNQVRRLQR--SN--DELVGQTEG 483

  Fly  1066 VRAQQQALGKQKY---DLSKWKYSELRDAINTSCDIELLEAC-------RQEF----------HR 1110
            ::.|.|.|..::.   .|......:||:.|    .:||...|       ||.|          |.
  Fly   484 LQVQIQHLQNRRAPSPQLRGMGGVQLRNKI----AVELPNDCLPNINDLRQIFDDSQAGLRSSHN 544

  Fly  1111 --RLKVYHAWKAK---NRKRTTMDENE------RAPRSVMEAAFKQPPLVQPIQEIVTAQHRYFR 1164
              ...::||...|   :.:||.:.:.:      .|..:...|||.........:.|..::.|  .
  Fly   545 GSDAAMHHAASVKRSSHTERTLLQQQQSSAAASAAAAAAAAAAFFDAKPTHLEENIFESKSR--N 607

  Fly  1165 IPFMRANAPDNTKRGLWYAHF------DGQWIARQMELHADKPPILLVAGTDDMQMCELSLEETG 1223
            :.|.||....:...|..:.|.      :|::.:               ||: ......|:|...|
  Fly   608 LEFERAKQKFDNPHGQHHHHHQRQRSGNGRYGS---------------AGS-SASRANLALPLKG 656

  Fly  1224 LTRKRGAEI-LEHEFNR---EWERNGGKAYK----NLGAAK 1256
            .|....:.: .:.|.||   |.|::.|..|.    ||...|
  Fly   657 TTNGGSSSVSSKDELNRQLYEKEQSAGAGYARNSINLDGLK 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670
MYSc_Myo6 71..754 CDD:276833
CBD_MYO6-like 765..913 CDD:409646 16/82 (20%)
ERM_helical <954..1020 CDD:466641 20/81 (25%)
MYO6_MIU_linker 1002..1093 CDD:480843 17/99 (17%)
MyUb_Myo6 1076..1116 CDD:439319 11/61 (18%)
Myosin-VI_CBD 1160..1246 CDD:465157 18/95 (19%)
CG31638NP_723186.2 Smc <233..>496 CDD:440809 60/271 (22%)
Blue background indicates that the domain is not in the aligned region.

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