DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and MYO1H

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_011536525.1 Gene:MYO1H / 283446 HGNCID:13879 Length:1044 Species:Homo sapiens


Alignment Length:1088 Identity:325/1088 - (29%)
Similarity:502/1088 - (46%) Gaps:204/1088 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADK 133
            :|:.|:|||:.|:.::.||||:..:|::||||:|: .:|....::.|.|.:..||||||:||||.
Human    24 SESAFVDNLRKRFSENLIYTYIGTLLVSVNPYQEL-GIYTVSQMELYQGVNFFELPPHVYAIADN 87

  Fly   134 AIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYL---CYSHDSAGPIETKILDANPVLEAFGNA 195
            |.|.|.....:..|::||||||||||::|.:|:|.   |....|......::|.:||||||||||
Human    88 AYRMMCAELNNHFILISGESGAGKTEASKKILEYFAVTCPMTQSLQIARDRLLFSNPVLEAFGNA 152

  Fly   196 KTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLR 260
            :|.||:|||||||::::.:|.:...|||:|..||:||||:..|:..|||:|:||.||||..::..
Human   153 RTLRNDNSSRFGKYMDIQFDFQGIPVGGHIISYLIEKSRVVYQNEGERNFHIFYQLLAGGEEERL 217

  Fly   261 DKLSLGK-PDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALG 324
            ..|.|.: |..|:|||                         |....|:..|.|...:..:..|..
Human   218 SYLGLERDPQLYKYLS-------------------------QGHCAKESSISDKNDWKTVSNAFS 257

  Fly   325 RLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLLGVDQTELRTA 389
            .:..::.:...::.::|:|||||||.|||  ||  .||.....:.:...|.. ||||..:.|..|
Human   258 VIDFTEADLENLFGIIASVLHLGNIGFEE--DD--QGCATIPDTHEIKWIAK-LLGVHPSVLLEA 317

  Fly   390 LVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQ--ASNFYI 452
            |..|.:::     |...::.||.:..:..||||:|||:|.|.|..:|..||.|:..:  .....|
Human   318 LTHRKIEA-----KTEEVICPLTLELSVYARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVI 377

  Fly   453 GVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDIIEL 517
            |:|||.|||.|..|.||||||||||||||:...:..||.||..|:.||:....|.:.:|:.|.:|
Human   378 GLLDIYGFEVFDKNGFEQFCINYCNEKLQQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKIICDL 442

  Fly   518 IEAKSNGIFTLLDEESKLPKPSYS-HFTAEVHKSWANHYRLGLPRSSRLKAH---RTLRDEEG-- 576
            :|.:..||.::||||...|.|:.. .|..::.:....|            ||   |.|...:|  
Human   443 VEERHKGIISILDEECIRPGPATDLSFLEKLEEKVGKH------------AHFETRKLAGPKGRK 495

  Fly   577 ------FLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNF 635
                  |.:.|:||.|.|.|:.|:|||||.|:..|:.::.:..|.:|:..|   ....:..:...
Human   496 RIGWMEFRLLHYAGEVTYCTKGFLEKNNDLLYRHLKEVLCKSKNIILRECF---LLAELENRRRP 557

  Fly   636 ISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGY 700
            .:||::||..|..|:|.|.....::|||||||.:....:|:..|...|:|..|.:..|.:...|:
Human   558 PTVGTQFKNSLSSLLETLISKEPSYIRCIKPNDRKEPSKFDDFLIRHQIKYLGLMEHLRVRRAGF 622

  Fly   701 P---------------------SRVLFADLY-SMYKSVLP---PELVSLPARTFCEAMFQSLNLS 740
            .                     .|::.:..| ..|||:.|   |.....||.. .|.:.:.:...
Human   623 AYRRKYEHFLQRYLGVELSHWVERLMMSLFYKDRYKSLCPDTWPHWHGPPAEG-VERLIKYIGYK 686

  Fly   741 AKDFKFGITKVFFRPGK--FVEFDRIMRSDPENMLAIVAKVKKWLIRSRWVKSALGALCVIKL-- 801
            .:::|.|.||:|.|..:  |...|....|..:.:..|.|..|:.|.|..:||....|   |||  
Human   687 PEEYKLGKTKIFIRFPRTLFATEDAFEFSKHQLVARIQATYKRCLGRREYVKKRQAA---IKLEA 748

  Fly   802 -------RNRIIYRNKCVLIAQRIARGFLARKQH------------RPRYQGIGKINKIRTNTLK 847
                   |..|..|...|.|.::..:||::|.:.            |..|     |..:|.:..|
Human   749 HWRGALARKAIQRRKWAVRIIRKFIKGFISRNKPLCPDNEEFIVFVRKNY-----ILNLRYHLPK 808

  Fly   848 TIEIASGLKMGREEIISGVNDIYRQI------------DDAIKKIKMNPRITQREM----DSMYT 896
            |:...|.|:  ...|:...:|:.|::            ..|.:|..|..::...|:    ...||
Human   809 TVLDKSWLR--PPGILENASDLLRKMCVRNLVQKYCRGITAERKAMMQQKVVTSEIFRGRKDGYT 871

  Fly   897 VVMANMNKLTV-------DLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIENKR 954
               .::|:..|       |:|.|:.:....|      |||..:...:..::..:.|||:.|    
Human   872 ---ESLNQPFVNSRIDEGDINPKVLQLISHE------KIQYGVPVIKYDRKGFKARQRQLI---- 923

  Fly   955 LKAEMETRRKAAEAQRLRQEEEDRRAALALQEQLEKEAKDDAKYRQQLEQERRDHELALRLANES 1019
                  ..:|||....|                        ||.:|::|..      ||:..:.|
Human   924 ------LTQKAAYVVEL------------------------AKIKQKIEYS------ALKGVSTS 952

  Fly  1020 NGQVEDSPPVIRNGVNDASPMGPNKLISFSQVVSNIASR-YLNKSENV 1066
            |  :.|...||.....|:...| :.::....|...:... .|.|.||:
Human   953 N--LSDGILVIHVSPEDSKQKG-DAVLQCGHVFEAVTKLVMLVKKENI 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670
MYSc_Myo6 71..754 CDD:276833 249/725 (34%)
CBD_MYO6-like 765..913 CDD:409646 41/191 (21%)
ERM_helical <954..1020 CDD:466641 10/65 (15%)
MYO6_MIU_linker 1002..1093 CDD:480843 15/66 (23%)
MyUb_Myo6 1076..1116 CDD:439319
Myosin-VI_CBD 1160..1246 CDD:465157
MYO1HXP_011536525.1 MYSc_Myo1 26..700 CDD:276829 249/725 (34%)
Adgb_C_mid-like <696..>763 CDD:412094 19/69 (28%)
globin helix H 696..720 CDD:412094 6/23 (26%)
IQ motif 744..762 CDD:412094 5/17 (29%)
Myosin_TH1 856..1037 CDD:461801 38/194 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.