DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and Myo81F

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001303492.1 Gene:Myo81F / 26067052 FlyBaseID:FBgn0267431 Length:2082 Species:Drosophila melanogaster


Alignment Length:1258 Identity:329/1258 - (26%)
Similarity:549/1258 - (43%) Gaps:245/1258 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPP 125
            |..|:..::|.....||..||..|.||||..:||:|||||:.| .::...||.:|:...||:|.|
  Fly    12 DMTEMSEIDEIGINQNLNVRYNSDIIYTYTGSILLAVNPYKTI-NIFNKQTISEYHTCKLGDLSP 75

  Fly   126 HVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLC-YSHDSAGPIETKILDANPVL 189
            ||||:|:.|...:....::|:.::|||||||||||||::|:||| .:.:.:..::.:||:||.:|
  Fly    76 HVFAVAEAAYTSIVDDNINQACVISGESGAGKTESTKFILQYLCTITSNVSSWVQQQILEANTIL 140

  Fly   190 EAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAG 254
            |||||||||||:||||||||::|.:|....:.|..|..||||:|||..||..|||||:.|.|:|.
  Fly   141 EAFGNAKTTRNDNSSRFGKFMQVCFDDNNCIKGCVILDYLLEQSRITFQSEGERNYHIMYQLVAQ 205

  Fly   255 APQQ--LRDKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFH 317
            ..:.  :.:...|...:.|:||        |....:.|..:.:||.                 |.
  Fly   206 GQKNIGIANTFHLRPAEFYKYL--------NTSNSEKINMNLESKK-----------------FD 245

  Fly   318 NLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLLGVD 382
            .:..|...|.:......|::.:::::|.||||.|.::..:|   ..::.:.:::::|.|.|||:.
  Fly   246 AVTMAFTVLQIPQFVIDGVFKVISSILWLGNIEFIDVDGEV---TDLTRSDQEAISIISMLLGLS 307

  Fly   383 QTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQ-SIPFQ 446
            :.:.:..|:.|.:     ..:|.:..:||||.||...|.|||||:||::|..:|..||. :.|.|
  Fly   308 RCDFKKVLLIRQI-----NVRGNITEIPLKIKEALENRHALAKALYSKMFTWLVSKINNCTNPGQ 367

  Fly   447 ASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDN 511
            ....::|||||.|||.|:.|||||.||||.||||.||||..:...||.:|:.||:....:.||||
  Fly   368 DDAKFLGVLDIFGFENFSHNSFEQLCINYTNEKLHKFFNHYVFALEQSIYEHEGIYFNHVEFTDN 432

  Fly   512 QDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLKAHRTLRDEEG 576
            ...:|::|.....:|.||.|:..:|:.|...|.:.:|..:.:|       .:.:|.......|..
  Fly   433 TPCLEILEKPPRCVFKLLTEQCHMPQGSDLAFLSNMHTEFESH-------PNYIKGSDRRHWETE 490

  Fly   577 FLVRHFAGAVCYNTEQFIEKNNDA--------LHASLEGLVQEC----DNPLLQTLFPSGSSTSV 629
            |.::|:||.|.|....|:|||.|.        :..|.:..:::.    |...:.:.:|.|||.|.
  Fly   491 FGIKHYAGLVIYAVGGFVEKNRDVQQDVMFEYMSYSKDVFIKDLSTYQDIQFINSSYPRGSSKSK 555

  Fly   630 RGKLNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLE 694
                  .:|...|:.||..|::.|:.....::||||||.:.....:..||.|.|||..|.:.::.
  Fly   556 ------CTVSDNFRNQLQSLIDVLQNTKPWYVRCIKPNLQKRPNNYNSSLVLDQLKYLGVVDIIR 614

  Fly   695 LMEHGYPSRVLFADLYSMYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFV 759
            :...|:|..:...|....||.::..:....|.: :...:.:...:...:::.|.:|:|.|...: 
  Fly   615 IRREGFPIHLSHKDFIVRYKCLIKNKSFEYPQK-YLTNILEKNGMPTTEWQIGKSKIFLRNAAY- 677

  Fly   760 EFDRIMRSDP--ENMLAIVAKVKKWLIRSRWVKSALGALCV------IKLRNRIIYRNKCVLIAQ 816
            |.....|.|.  :|.:.|....||:.|:..::::....|.:      .:||.|.:...:..::.|
  Fly   678 ELLETNRKDTLYKNAVIIQKNWKKYYIQKSFLRNKQAVLRIQHAYRGWRLRIRFMRMRRSAIVIQ 742

  Fly   817 RIARGFLARK------------QHRPRYQGI-GKINKIRTNTLKTIEIASGLKMGREEIISGVND 868
            ...||..||:            :...:..|| .::..|.|.||...|     :..:||:     .
  Fly   743 SRLRGVFAREVAAALREMKRVDEELKKRDGIYEQLTSITTKTLADCE-----RSIQEEL-----S 797

  Fly   869 IYRQIDDAIKKIKMNPRITQREMDSMYTVVMANMNKLTVDLNTK---LKEQQQAEEQERLRKIQE 930
            :...|.|.| :....|...:.:.||  ....:::.:.||:|:..   |.|.:.|.|...:::|.:
  Fly   798 VLAHISDNI-RASAKPLSDKNDSDS--NTARSSIKQNTVNLDNMFDFLCESKGAFENALIKEIND 859

  Fly   931 -------ALEAE-----RAAKEAEEQRQREEIENKRLKA-------------------EMETRRK 964
                   .|:.|     ......:.|:..:....|.::.                   ..|...:
  Fly   860 NWNNLVKNLDEEIGLCIHTEDSFDSQKTGKLFTTKTVRTLPEPTVPPPPPPVSISANLNSEPIYE 924

  Fly   965 AAEAQRLRQEEEDRRAALALQEQLEKEAKDDAK--------YRQQLEQ---------ERRDHELA 1012
            |....:|...:|.::....|.:.  |..||::|        .:.|:::         |::.|||.
  Fly   925 AINLYKLTTTKEIKKEKYMLLDY--KSIKDNSKKPSTSSVFVKYQIDERENRRKQRVEKKIHELT 987

  Fly  1013 L-------RLAN---------ESNGQVED--------SPPVIRNGVNDASPMGPNKLISFSQVV- 1052
            |       .:.|         |:.....|        |.|..:...:|.:......:.|.|..: 
  Fly   988 LIDIHKDIHIDNSFYNILEFAENYFNTHDLSSDCNFISTPTQKGKSSDKTAKHEMTMFSKSDKIP 1052

  Fly  1053 ---------SNIA---------SRYLNKSENVRAQQQ------ALGKQKYDLSKWKYSELRDAIN 1093
                     .|:.         .:|:....|...:.|      .||.::        .||||.|.
  Fly  1053 TSHIHMYDPENVVLSCSMFRELCKYMRGELNAERELQIIQYIVGLGIER--------EELRDEIF 1109

  Fly  1094 TSC------------------------------------DIELLEACRQEFHRRLKVYHAWKAKN 1122
            ..|                                    .:..::....|...:|:.|..|...|
  Fly  1110 IQCIRQSRNNPNIDWTDRIWIILCLSIVAFQPSKLLFRYFVSFIKKSMIELDGKLRQYSQWCFDN 1174

  Fly  1123 RKRTTMDENERAPRSVMEAAFKQ 1145
            .|.|.:......|.||..||.::
  Fly  1175 CKSTKVSTRMYPPSSVEVAAMRR 1197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832
Myosin_head 59..754 CDD:278492 237/708 (33%)
MYSc_Myo6 71..754 CDD:276833 234/698 (34%)
RILP-like <968..1015 CDD:304877 13/70 (19%)
Myosin-VI_CBD 1160..1246 CDD:293129
Myo81FNP_001303492.1 MYSc 8..685 CDD:214580 239/721 (33%)
Motor_domain 23..673 CDD:277568 234/697 (34%)
MyTH4 1091..1194 CDD:279165 18/110 (16%)
B41 1202..1419 CDD:214604
UBQ 1202..1297 CDD:294102
FERM_M 1307..1419 CDD:278785
PH-like 1415..1523 CDD:302622
MyTH4 1664..1771 CDD:279165
UBQ 1780..1860 CDD:294102
B41 1781..1992 CDD:214604
FERM_B-lobe 1893..1984 CDD:271216
PH-like 1988..2076 CDD:302622
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1389at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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