Sequence 1: | NP_001014650.2 | Gene: | jar / 42889 | FlyBaseID: | FBgn0011225 | Length: | 1268 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_037115.2 | Gene: | Myo1d / 25485 | RGDID: | 621321 | Length: | 1006 | Species: | Rattus norvegicus |
Alignment Length: | 1237 | Identity: | 329/1237 - (26%) |
---|---|---|---|
Similarity: | 519/1237 - (41%) | Gaps: | 336/1237 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 FLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADKAIRD 137
Fly 138 MRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIETK-----ILDANPVLEAFGNAKT 197
Fly 198 TRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLRDK 262
Fly 263 LSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALGRLG 327
Fly 328 LSDTEKLGIYSLVAAVLHLGNIAFEEIPDD----VRGGCQVSEASEQSLTITSGLLGVDQTELRT 388
Fly 389 ALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQ------- 446
Fly 447 ASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDN 511
Fly 512 QDIIELIEAKSNGIFTLLDE-----------------ESKLPKPSYSHFTAEVHKSWANHYRLGL 559
Fly 560 PRSSRLKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSG 624
Fly 625 SSTSVRGKLNFISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGT 689
Fly 690 ISVLELMEHGYPSRVLFADLYSMYKSV---------LPPELVSLPARTFCEAMFQSLNLSAKDFK 745
Fly 746 FGITKVFFRPGKFVEFDRIMRSDPENMLAIVAKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNK 810
Fly 811 CVLIAQRIARGFLARKQHRPRYQGIGKINKIRTNTLKTIEIASGLKMGRE-EIISGVNDIYRQ-- 872
Fly 873 ----IDDAIKKIK--MNPRITQREMDSMYTVVMANMNKLTVDLNTKLKEQQQAEEQERLRKIQEA 931
Fly 932 LEAERAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRRAALALQEQLEKEAKDDA 996
Fly 997 KYRQQLEQERRDHELALRLANESN--GQVEDSPPVIRNGVNDASPMG-----PNKLIS------- 1047
Fly 1048 -FSQVVSN---IASRYLNKSENVRAQQQALGKQKYDLSKWKYSELRDAINTSCDIELLEACRQEF 1108
Fly 1109 HRRLKVYHAWKAKNRKRTTMDENERAPRSVMEAAF-KQPPLVQPIQEIVTAQHRYFRIPFMRANA 1172
Fly 1173 PDNTKRGLWYAHFDGQWIARQMELHADKPPILLVAGTDDMQMCELSLE------ETGLTRKRGAE 1231
Fly 1232 IL 1233 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
jar | NP_001014650.2 | Myosin_N | 7..45 | CDD:280832 | |
Myosin_head | 59..754 | CDD:278492 | 244/722 (34%) | ||
MYSc_Myo6 | 71..754 | CDD:276833 | 244/722 (34%) | ||
RILP-like | <968..1015 | CDD:304877 | 8/46 (17%) | ||
Myosin-VI_CBD | 1160..1246 | CDD:293129 | 13/80 (16%) | ||
Myo1d | NP_037115.2 | MYSc_Myo1 | 24..682 | CDD:276829 | 244/722 (34%) |
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 | 572..594 | 7/21 (33%) | |||
Interaction with calmodulin. /evidence=ECO:0000269|PubMed:8034741 | 776..896 | 28/157 (18%) | |||
Myosin_TH1 | 803..996 | CDD:399188 | 48/271 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D122881at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |