DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and myo7aa

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_073784889.1 Gene:myo7aa / 252846 ZFINID:ZDB-GENE-020709-1 Length:2232 Species:Danio rerio


Alignment Length:1448 Identity:401/1448 - (27%)
Similarity:596/1448 - (41%) Gaps:359/1448 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PKRTCHFDDIH-SSCDGPQDHDDNCELMLLNEATFLDNLKTRYYKDKIY------TYVANILIAV 97
            |:...:...:| :|..|.   :|...|..||||..|.||..||.:..||      ||..:||:||
Zfish    79 PQNATNIKPMHPTSIHGV---EDMIRLGDLNEAGILRNLLIRYREHLIYTNCGGRTYTGSILVAV 140

  Fly    98 NPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTK 162
            ||| ::..:|..|.|:.|..:.:||:|||:|||||....:|:.....|..|:|||||||||||||
Zfish   141 NPY-QLLPIYTADQIRLYTNKKIGEMPPHIFAIADNCYFNMQRNNKDQCCIISGESGAGKTESTK 204

  Fly   163 YLLKYLCYSHDSAGPIETKILDANPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISH 227
            .:|::|.........||.::|:|||:|||||||||.||:|||||||:|::|::.:..:.|..|..
Zfish   205 LILQFLAAISGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNKRGAIEGAKIEQ 269

  Fly   228 YLLEKSRICTQSAEERNYHVFYMLLAGAPQQLRDKLSLGKPDDYRYLS--GCTQYFANAKTEQLI 290
            |||||||:|.|:.:|||||:||.:|.|.....:.:|.|.|..||.||:  .||          :.
Zfish   270 YLLEKSRVCRQARDERNYHIFYCMLKGMTPDQKKQLGLSKATDYTYLTIGNCT----------VC 324

  Fly   291 PGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIP 355
            .|.                 ||.:.:.|:..|:..|..:|.|...|..|:||:||:||:.:|...
Zfish   325 DGR-----------------DDQKEYSNIRSAMKVLMFTDKENWEISKLLAAILHMGNLRYEART 372

  Fly   356 DDVRGGCQVSEASEQSLTITSGLLGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNAR 420
            .|....|:|...|  :||..:.||.||..:|...|.||.:.:     :|..:..||.|.:|.:.|
Zfish   373 YDNLDACEVVRCS--ALTTAAVLLEVDLKDLMNCLTSRTIIT-----RGETVSTPLSIEQALDVR 430

  Fly   421 DALAKAIYSRLFDRIVGLIN------QSIPFQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEK 479
            ||..|.||.|||..||..||      .|:..:|....||:|||.|||.|.||||||.|||:.||.
Zfish   431 DAFVKGIYGRLFVWIVEKINAAIYKPPSLELKAVRRSIGLLDIFGFENFMVNSFEQLCINFANEN 495

  Fly   480 LQKFFNDNILKNEQELYKREGLNVPEITFTDNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFT 544
            ||:||..::.|.|||.|..|.:|...|.||||||.:::|..|...|.:|:|||||.||.:.:...
Zfish   496 LQQFFVRHVFKLEQEEYNLENINWQHIEFTDNQDALDMIAIKPMNIISLIDEESKFPKGTDTTML 560

  Fly   545 AEV---HKSWANHYRLGLPRSSRLKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLE 606
            .::   ||...|:    :|..:..        |..|.::||||.|.|.|..|:|||.|.||..:.
Zfish   561 NKLNSQHKLNTNY----IPPKNTY--------ETQFGIQHFAGVVYYETRGFLEKNRDTLHGDII 613

  Fly   607 GLVQECDNPLLQTLFPS----------------------GSSTSVRGKLNFISVGSKFKTQLGEL 649
            .||....|..::.:|.:                      |:.|..|..    ::.|:||..|..|
Zfish   614 QLVHSSKNKFIKQIFQADVAMFLCGYWSDSLGKAGSLHKGAETRKRSP----TLSSQFKRSLELL 674

  Fly   650 MEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADLYSMYK 714
            |..|......|:||||||.......|:..|.:.||:.||.:..:.:...|||.|..|.:....|:
Zfish   675 MRTLSVCQPFFVRCIKPNEYKKPMLFDRELCVRQLRYSGMMETIRIRRAGYPIRYTFVEFVDRYR 739

  Fly   715 SVLP---PELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFR---------------PGKFVEF 761
            .::|   |.......|..|:.:.:::.....|::.|.||:|.:               ..|.:..
Zfish   740 VLMPGVKPAYKQEDLRGTCQRIAEAVLGRDDDWQMGKTKIFLKDHHDMLLEIERDKAITDKVILI 804

  Fly   762 DRIMR--SDPENMLAIVAKVKK--WLIRSRW----VKSALGALCVIKLRNRIIYRNK-------- 810
            .:::|  .|..|.|    |:||  .||:..|    .:...||:.....|.:.:||::        
Zfish   805 QKVVRGFKDRSNFL----KMKKSAMLIQKTWRGYYCRKNYGAMRGGFSRLQALYRSRKLYQTYHV 865

  Fly   811 ---CVLIAQRIARGFLARKQHRPRYQGIGKINKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQ 872
               .:::.|...||||.|:..|.|...:           .||:..:...:.|.        :|::
Zfish   866 ARQRIMLFQGRCRGFLVRRAFRHRLWAV-----------ITIQAYTRGMIARR--------LYKR 911

  Fly   873 IDDAIKKIKMNPRITQREMDSMYTVVMANMNKLTVDLNT-KLKEQQQAEEQERLRKIQEALEAER 936
            :....::     |:...::.      :|...||...::. |.||:.:...||||.::... :|||
Zfish   912 LKGEYRR-----RLEAEKLR------LAEEQKLRNQMSARKAKEEAEKMHQERLAQLARE-DAER 964

  Fly   937 AAKEAEEQRQREEIENKRLKAEMETRRKA-----------------------------AEAQRLR 972
            ..||.:|.|::.|:.::..||..|....:                             .|.....
Zfish   965 EKKERQEARRKMEMLDQMEKARQEPVNDSDMVDKMFGFLGTTNSFPGQEGQAPAGFEDLERTHRE 1029

  Fly   973 QEEEDRRAALAL-QEQLE-----KEAKDDAKY----------RQQLEQERRDHE----------- 1010
            .|.||...:|.| ::.||     |.||..|.|          |:.|:|....||           
Zfish  1030 LEVEDLDESLPLPEDDLEDLSEYKFAKFSATYFQGTSTHTYMRRPLKQPLLFHEDEGDQLAALAV 1094

  Fly  1011 --LALRLANESNGQVEDSP-PVIRNGVNDASPMGP------------------------------ 1042
              ..||.       :.|.| |.....::|.|...|                              
Zfish  1095 WITVLRF-------MGDLPEPKYHTAISDGSEKIPVMTKIYETLGKKTYKRELQALQGEGENTHI 1152

  Fly  1043 ---------NKLISF-----SQVVSNIASRYLNKSE-NVRAQQQALGKQKYDLSKWKY------- 1085
                     :||:|.     |::...:..| ||..| .|........:...:|.|..:       
Zfish  1153 ESHKKSSVRHKLVSLTLKKKSKITEEVTKR-LNDGEYTVHGNSMLEDRPTSNLEKLHFIIGNGIL 1216

  Fly  1086 -SELRDAINTSCDIELLEACRQEFHRRLKVYHA--W--------------KAKNRKRTTMDE--- 1130
             ..|||.|  .|.|     |:|......|..||  |              |.....|..:.|   
Zfish  1217 RPGLRDEI--YCQI-----CKQLNQNPSKSSHARGWILMSLCVGCFAPSEKFVKYLRNFISEGPP 1274

  Fly  1131 ------NERAPRSVMEAAFKQPPLVQPIQEIVTAQHRYFRIPFMRANAPDNTKRGLWYAHFDGQW 1189
                  .||..|:.:.....|||....:|...:.:.....:.||     |.|.:.|         
Zfish  1275 GYAPYCEERLRRTFVNGTRTQPPSWLELQATKSKKPIMLPVTFM-----DGTTKTL--------- 1325

  Fly  1190 IARQMELHADKPPILLVAGTDDMQMCELSLEETGLTRKRGAEILEHEFNREWERNGGKAY----- 1249
                          |..:.|...::|....::..|..:.|..:....|::......|..:     
Zfish  1326 --------------LTDSATTAKELCNALSDKISLQDRFGFSLYIALFDKVSSLGSGNDHVMDAV 1376

  Fly  1250 -------KNLGAAKPNGP 1260
                   |..||.:.|.|
Zfish  1377 SQCEQYAKEQGAQERNAP 1394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670 1/8 (13%)
MYSc_Myo6 71..754 CDD:276833 266/724 (37%)
CBD_MYO6-like 765..913 CDD:409646 31/167 (19%)
ERM_helical <954..1020 CDD:466641 23/123 (19%)
MYO6_MIU_linker 1002..1093 CDD:480843 26/157 (17%)
MyUb_Myo6 1076..1116 CDD:439319 11/47 (23%)
Myosin-VI_CBD 1160..1246 CDD:465157 11/85 (13%)
myo7aaXP_073784889.1 None

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