DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and Myo6

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_006510898.1 Gene:Myo6 / 17920 MGIID:104785 Length:1294 Species:Mus musculus


Alignment Length:1313 Identity:667/1313 - (50%)
Similarity:896/1313 - (68%) Gaps:72/1313 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LEDTQLVWVRDAAEGYIQGRITEIGAKEFEVTPTDRK-----------YPKRTCHFDDIHSSCDG 55
            :||.:.||.....:|:..|.|.:||.....:.|.::|           :|...          |.
Mouse     1 MEDGKPVWAPHPTDGFQMGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEE----------DS 55

  Fly    56 PQDHDDNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSL 120
            .:|.:|||.||.|||||.|.|:|.||.||:|||||||||||||||.:|.::|:.||||.|.|:||
Mouse    56 KKDVEDNCSLMYLNEATLLHNVKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSDTIKSYQGKSL 120

  Fly   121 GELPPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIETKILDA 185
            |.:|||||||||||.|||:|.|:||||||||||||||||:||::|:||..|:.:...|:.:|::|
Mouse   121 GTMPPHVFAIADKAFRDMKVLKMSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEA 185

  Fly   186 NPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYM 250
            ||:|||||||||.|||||||||||:|:|::.|..||||::|||||||||||.|..||||||:||.
Mouse   186 NPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYR 250

  Fly   251 LLAGAPQQLRDKLSLGKPDDYRYLS-GCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQ 314
            |.|||.:.:|:||.|..||::|||: |||::|||.:|::.|..::||..:.:.|.||||::||:.
Mouse   251 LCAGASEDIREKLHLSSPDNFRYLNRGCTRFFANKETDKQILQNRKSPEYVKAGSLKDPLLDDHG 315

  Fly   315 HFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLL 379
            .|..:..|:.::||.|.|||.::.:||.|||||||.||| .....|||.:...|..||...:.||
Mouse   316 DFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE-AGSTSGGCNLKNKSAPSLEYCAELL 379

  Fly   380 GVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIP 444
            |:||.:||.:|.:|||.:..||.|||||.||||:.:|:||||||||.:||.|||.:|..:||..|
Mouse   380 GLDQDDLRVSLTTRVMLTTAGGTKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 444

  Fly   445 FQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFT 509
            |:.|:::||||||||||||..||||||||||||||||:|||:.|||.|||||::|||.|.|:.:.
Mouse   445 FETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYV 509

  Fly   510 DNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLKAHRTLRDE 574
            ||||.|:|||.|..||..:||||::||:||..|||:.||:...:|:||.:||.|:|..||.|||:
Mouse   510 DNQDCIDLIEVKLVGILDILDEENRLPQPSDQHFTSVVHQKHKDHFRLTIPRKSKLAVHRNLRDD 574

  Fly   575 EGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTS-----VRGKLN 634
            |||::|||||||||.|.||:||||||||.|||.|:.|..:..::.||.|.::.:     ..|||:
Mouse   575 EGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRALFESSTNNNKDTKQKAGKLS 639

  Fly   635 FISVGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHG 699
            |||||:||||||..|::||...|.:||||||||.||....|||:..|:||:|||.:|||:||:.|
Mouse   640 FISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 704

  Fly   700 YPSRVLFADLYSMYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFVEFDRI 764
            :|||..|.:||:|||..:|.:|..|..|.||:|:|::|.|:..|:|||:||||||||||.|||:|
Mouse   705 FPSRASFHELYNMYKKYMPEKLARLDPRLFCKALFKALGLNEVDYKFGLTKVFFRPGKFAEFDQI 769

  Fly   765 MRSDPENMLAIVAKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHR 829
            |:|||:::..:|.:|..||:.|||.|....:|.||||:|:|.||.:..:..|:..|.:|.:::|:
Mouse   770 MKSDPDHLAELVKRVNLWLVCSRWKKVQWCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHK 834

  Fly   830 PRYQGIGKINKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSM 894
            ||..|:.|:..::....|..|:.|.||.|:.|:...:.::...||..:.||| :..:|:.::...
Mouse   835 PRIDGLVKVGTLKKRLDKFNEVVSALKDGKPEVNRQIKNLEISIDALMAKIK-STMMTREQIQKE 898

  Fly   895 YTVVMANMNKLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIENKRLKAEM 959
            |..::.:...|   |:...|::||.||.||||:|||.:|.||..:|.:|:|:|:|.|.:|:|.||
Mouse   899 YDALVKSSEDL---LSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEERRRKEEEERRMKLEM 960

  Fly   960 ETRRKAAEAQRLRQEEEDRRAALALQEQLEKEAKDDAKYRQQLEQERRDHELALRLANESNGQVE 1024
            |.:||..|.:|.::|::::|....::.||.::.:::::.:..|.||.||.|||||:|...:..:.
Mouse   961 EAKRKQEEEERKKREDDEKRIQAEVEAQLARQREEESQQQAVLAQECRDRELALRIAQNESELIS 1025

  Fly  1025 D------------SPPVIRNGVNDASPMGPNKLISFSQVVSNIASRYLNKSENVRAQQQALGKQK 1077
            |            |.|...........|.|.::   ::.:|.|.||    ...|:|.:.|.|.:|
Mouse  1026 DEAQGDMALRSLSSCPATSKTNGTRPQMTPEQM---AKEMSEILSR----GPAVQATKAAAGTKK 1083

  Fly  1078 YDLSKWKYSELRDAINTSCDIELLEACRQEFHRRLKVYHAWKAKNRKRTTMDENERAPRSVMEAA 1142
            :|||||||:||||.||||||||||.|||:|||||||||||||:||:||.|..| :|||:||.:..
Mouse  1084 HDLSKWKYAELRDTINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETE-QRAPKSVTDYD 1147

  Fly  1143 F--------KQPPLVQ-PI--QEI-VTAQHRYFRIPFMRA----NAPDNTKRGLWYAHFDGQWIA 1191
            |        :|.|..| |.  ||| :..|.|:|||||:|.    ..|.|.|:|.|||||||.|||
Mouse  1148 FAPFLNNSPQQNPAAQLPARQQEIDMKRQQRFFRIPFIRPADQYKDPQNKKKGWWYAHFDGPWIA 1212

  Fly  1192 RQMELHADKPPILLVAGTDDMQMCELSLEETGLTRKRGAEILEHEFNREWERNGGKAYKNLG--- 1253
            ||||||.||||||||||.|||:||||:|||||||||||||||..:|...|||.||..|....   
Mouse  1213 RQMELHPDKPPILLVAGKDDMEMCELNLEETGLTRKRGAEILPRQFEEIWERCGGIQYLQSAIES 1277

  Fly  1254 -AAKPNGPAAAMQ 1265
             .|:|....|.:|
Mouse  1278 RQARPTYATAMLQ 1290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832 10/48 (21%)
Myosin_head 59..754 CDD:278492 412/700 (59%)
MYSc_Myo6 71..754 CDD:276833 404/688 (59%)
RILP-like <968..1015 CDD:304877 14/46 (30%)
Myosin-VI_CBD 1160..1246 CDD:293129 63/89 (71%)
Myo6XP_006510898.1 MYSc_Myo6 71..759 CDD:276833 404/688 (59%)
SH3_and_anchor <845..>928 CDD:275056 24/86 (28%)
Myosin-VI_CBD 1177..1267 CDD:374599 63/89 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835870
Domainoid 1 1.000 761 1.000 Domainoid score I83
eggNOG 1 0.900 - - E2759_KOG0163
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56417
Inparanoid 1 1.050 1187 1.000 Inparanoid score I195
Isobase 1 0.950 - 0 Normalized mean entropy S1622
OMA 1 1.010 - - QHG59165
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 1 1.000 - - FOG0005395
OrthoInspector 1 1.000 - - oto92630
orthoMCL 1 0.900 - - OOG6_105053
Panther 1 1.100 - - LDO PTHR13140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4674
SonicParanoid 1 1.000 - - X3827
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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