DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and Myo10

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_062345.2 Gene:Myo10 / 17909 MGIID:107716 Length:2062 Species:Mus musculus


Alignment Length:1165 Identity:353/1165 - (30%)
Similarity:551/1165 - (47%) Gaps:218/1165 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VWVRD-----------AAEGYIQGRITEIGA----KEFEVTPTDRKYPKRTCHFDDIHSSCDGPQ 57
            ||:|:           .|||.:..: |:.|.    |:..:|      .::......:|.     :
Mouse    11 VWLRENGQHFPSTVNSCAEGVVVFQ-TDYGQVFTYKQSTIT------NQKVTAMHPLHE-----E 63

  Fly    58 DHDDNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGE 122
            ..||...|..|:..:.:.||..||.:::||||:.:|:.:||||:.|..||...|:::|:...|||
Mouse    64 GVDDMASLAELHGGSIMYNLFQRYKRNQIYTYIGSIIASVNPYQPIAGLYERATMEEYSRCHLGE 128

  Fly   123 LPPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCY---------SHDSAGPI 178
            ||||:||||::..|.:.....:|.:::|||||||||||||.:||:|..         ..:....:
Mouse   129 LPPHIFAIANECYRCLWKRHDNQCVLISGESGAGKTESTKLILKFLSVISQQTLDLGLQEKTSSV 193

  Fly   179 ETKILDANPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEER 243
            |..||.::|::||||||||..||||||||||::::...:..:.||.|..|||||:|:..|:..||
Mouse   194 EQAILQSSPIMEAFGNAKTVYNNNSSRFGKFVQLNICQQGNIQGGRIVDYLLEKNRVVRQNPGER 258

  Fly   244 NYHVFYMLLAGAPQQLRDKLSLGKPDDYRYL--SGCTQYFANAKTEQLIPGSQKSKNHQQKGPLK 306
            |||:||.||||..|..|::..|..|::|.||  ||||:                           
Mouse   259 NYHIFYALLAGLDQGEREEFYLSLPENYHYLNQSGCTE--------------------------- 296

  Fly   307 DPIIDDYQHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQS 371
            |..|.|.:.|..:..|:..:..|..|...:..|:|.:||||||.|     ...||.|:  ..:.:
Mouse   297 DKTISDQESFRQVITAMEVMQFSKEEVREVLRLLAGILHLGNIEF-----ITAGGAQI--PFKTA 354

  Fly   372 LTITSGLLGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIV 436
            |..::.|||:|.|:|..||..|.|.     .:|..|:.||.:.:|.::||:||.|:|:|.|:.::
Mouse   355 LGRSADLLGLDPTQLTDALTQRSMI-----LRGEEILTPLSVQQAVDSRDSLAMALYARCFEWVI 414

  Fly   437 GLINQSIPFQASNFYIGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGL 501
            ..||..|..:.....||:|||.|||.|.||.||||.|||.|||||::||.:|...||..|.||||
Mouse   415 KKINSRIKGKDDFKSIGILDIFGFENFEVNHFEQFNINYANEKLQEYFNKHIFSLEQLEYSREGL 479

  Fly   502 NVPEITFTDNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLK 566
            ...:|.:.||.:.::||| |..|:..|::|||..|:.:.|....::|...||::....||.:   
Mouse   480 VWEDIDWIDNGECLDLIE-KKLGLLALINEESHFPQATDSTLLEKLHSQHANNHFYVKPRVA--- 540

  Fly   567 AHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRG 631
                   ...|.|:|:||.|.|:....:|||.|.....|..|::|.....:..||...||.:.:.
Mouse   541 -------VNNFGVKHYAGEVQYDVRGILEKNRDTFRDDLLNLLRESRFDFIYDLFEHVSSRNNQD 598

  Fly   632 KLNFIS------VGSKFKTQLGELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTI 690
            .|...|      |.|:||..|..||..|..:...|:||||||::.:..||:..:.|.||:.||.:
Mouse   599 TLKCGSKHRRPTVSSQFKDSLHSLMATLSSSNPFFVRCIKPNTQKMPDQFDQVVVLNQLRYSGML 663

  Fly   691 SVLELMEHGYPSRVLFADLYSMYKSVLPPELVSLP--ARTFCEAMFQSLNLSAKDFKFGITKVFF 753
            ..:.:.:.||..|..|.|.|..||.::  ..::||  .|..|..:.|..:.|..:::.|.||||.
Mouse   664 ETVRIRKAGYAVRRPFQDFYKRYKVLM--RNLALPDDIRGKCTVLLQVYDASNSEWQLGKTKVFL 726

  Fly   754 RPGKFVEFDRIMRSDPENMLAIV-AKVKKWLIRSRWVKSALGALCVIK------LRNRIIYRNKC 811
            |.....:.::....:.:....:: |.:..:|.|.::.|...|.:.:.|      .|.:.::..|.
Mouse   727 RESLEQKLEKRREEEIDRAAMVIRAHILGYLARKQYRKVLCGVVTIQKNYRAFLARKKFLHLKKA 791

  Fly   812 VLIAQRIARGFLARKQHRPRYQGIGKINKIRTNTLKTIEIASGLKMGREEIISGVNDIYRQIDDA 876
            .::.|:..||.|||:                                          :|||:   
Mouse   792 AIVFQKQLRGQLARR------------------------------------------VYRQL--- 811

  Fly   877 IKKIKMNPRITQREMDSMYTVVMANMNKLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEA 941
                    ...:||::.                ..:.:|:::.||:||        |.|||.:||
Mouse   812 --------LAEKRELEE----------------KKRREEEKKREEEER--------ERERAQREA 844

  Fly   942 EEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRRAALALQE--QLEKEAKD--DAKYRQQL 1002
            :..|..:|.|.:| :.|:|..:|:.....|.:|.|.:|....::|  :||||.:|  ..|.||:|
Mouse   845 DLLRAHQEAETRR-QQELEALQKSQREADLTRELEKQRENKQVEEILRLEKEIEDLQRMKERQEL 908

  Fly  1003 E---------QERRDHEL------ALRLANE-----SNGQVEDSPPVIRNGVNDASPMGPNKLIS 1047
            .         |:.||.||      |.|.|.|     :..::::....|...::..|.:...:|..
Mouse   909 SLTEASLQKLQQLRDEELRRLEDEACRAAQEFLESLNFDEIDECVRNIERSLSVGSEISGEELSE 973

  Fly  1048 FSQVVS------NIASRYLNK---SENVRAQQQALGKQKYDLSKWKYSELR-DAINTSCD 1097
            .::..|      |.:..|..:   .|...|...|. |...:.|:..:|:.| ..|.||.|
Mouse   974 LAESASGEKPNFNFSQPYPAEEEVDEGFEADDDAF-KDSPNPSEHGHSDQRTSGIRTSDD 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670 10/55 (18%)
MYSc_Myo6 71..754 CDD:276833 260/701 (37%)
CBD_MYO6-like 765..913 CDD:409646 19/154 (12%)
ERM_helical <954..1020 CDD:466641 27/89 (30%)
MYO6_MIU_linker 1002..1093 CDD:480843 23/120 (19%)
MyUb_Myo6 1076..1116 CDD:439319 7/23 (30%)
Myosin-VI_CBD 1160..1246 CDD:465157
Myo10NP_062345.2 SH3_19 7..58 CDD:465815 10/53 (19%)
MYSc_Myo10 77..727 CDD:276840 260/701 (37%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 619..641 10/21 (48%)
DUF5401 <727..982 CDD:375164 65/332 (20%)
SAH. /evidence=ECO:0000250|UniProtKB:Q9HD67 814..882 23/92 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..844 9/29 (31%)
TPH <840..946 CDD:464007 33/106 (31%)
MYO10_CC 882..932 CDD:465249 15/49 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 963..1047 16/71 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1062..1089
PH-like 1185..>1227 CDD:473070
PH2_MyoX 1219..1320 CDD:270108
PH3_MyoX-like 1385..1510 CDD:270109
MyTH4 1553..1699 CDD:214535
FERM_F1_Myosin-X 1701..1796 CDD:340726
B41 1708..1962 CDD:214604
FERM_C_MyoX 1958..2046 CDD:270023
Blue background indicates that the domain is not in the aligned region.

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