DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and hum-8

DIOPT Version :9

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001294574.1 Gene:hum-8 / 176872 WormBaseID:WBGene00002041 Length:1279 Species:Caenorhabditis elegans


Alignment Length:1274 Identity:548/1274 - (43%)
Similarity:776/1274 - (60%) Gaps:117/1274 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VWVRDAAEGYIQGRITEIGAKEFEVTPTDRKYPKRTCHFDDIHSSCDGPQDH-DDNCELMLLNEA 71
            ||:.||.:|:...||.::.|..|.:...|......|..|:|:.:..|..:.| :|||:||.||||
 Worm    79 VWITDATDGFRAARIIDLSATGFTLRLLDNTGDTVTRVFEDVLACEDDSRRHVEDNCQLMHLNEA 143

  Fly    72 TFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADKAIR 136
            |.|:|::.||...|||:|||||||::|||:.|...|:...||:|.|:|||:..||:||||||:.|
 Worm   144 TLLNNIRLRYQNGKIYSYVANILISINPYQTIDGFYSLQKIKEYRGKSLGQKEPHIFAIADKSYR 208

  Fly   137 DMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDS-AGPIETKILDANPVLEAFGNAKTTRN 200
            :|..::.|||||||||||||||||.|.:|:|||.:..| ||.|:.::|:.||:|||||||||.||
 Worm   209 EMIRHRKSQSIIVSGESGAGKTESQKAVLRYLCENWGSGAGEIQKRLLETNPILEAFGNAKTLRN 273

  Fly   201 NNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLRDKLSL 265
            |||||||||:::|:.....|.|||:||||||.||||.|:|.|||||:||.|:||:..:|...|:|
 Worm   274 NNSSRFGKFVQIHFADTGNVAGGYVSHYLLETSRICRQAAGERNYHIFYQLIAGSSPELFKFLAL 338

  Fly   266 GKPDDYRYLS-GCTQYFA--NAKTEQLIPGSQKSKNHQQKGPLKDP------IIDDYQHFHNLDK 321
            |:|:.:.||. |...:|.  ::.|...||          |..|.||      ::||:..|..|:.
 Worm   339 GQPNQFNYLKRGFIGFFTHPSSGTTSKIP----------KNRLSDPKFTQDSMVDDFSDFQRLEY 393

  Fly   322 ALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLLGVDQTEL 386
            ||...|||:.|...|::.:||:|||||:.|||..||.||||:|...|||.|...:.|||::..||
 Worm   394 ALKLTGLSEQEIHFIWTTIAAILHLGNVEFEESLDDSRGGCKVFNGSEQDLIQAARLLGLETMEL 458

  Fly   387 RTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQASNFY 451
            :..|.:|:||:..||.:||:|.||||.:||.:.||||:|||||:|||.:|..||.||||:.|..:
 Worm   459 KMGLCARIMQTTKGGARGTLIRVPLKPHEACSGRDALSKAIYSKLFDWLVSRINDSIPFEKSTNF 523

  Fly   452 IGVLDIAGFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDIIE 516
            :||||:||||::..|||||||||:||||||.|||..||:.|||||::|||||.:|.|.||||.||
 Worm   524 VGVLDVAGFEFYAKNSFEQFCINFCNEKLQNFFNQRILREEQELYEKEGLNVRKIEFIDNQDCIE 588

  Fly   517 LIEAKSNGIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLKAHRTLRDEEGFLVRH 581
            |.|.|.||:|.|||||:|.|..:|..||...|:....|:||..||.|::|:||.|||:||.|:||
 Worm   589 LFELKGNGLFDLLDEEAKFPTSNYKSFTKRAHEENRKHFRLDTPRKSKVKSHRELRDDEGLLIRH 653

  Fly   582 FAGAVCYNTEQFIEKNNDALHASLEGLVQECDNPLLQTLFPSGSSTSVRGKLNFISVGSKFKTQL 646
            :||:|||.|:.|:|||:|.||.||:.|:::....||.:||.| ::...:.||..:|||:|||.||
 Worm   654 YAGSVCYETKHFVEKNDDLLHNSLQILIEQSTIRLLVSLFGS-TAYPTKSKLKALSVGAKFKNQL 717

  Fly   647 GELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADLYS 711
            ..|:.|||..||:|:||||||::||..:|:||..|:||:|:|..|||:||:.|:|||..|.|||:
 Worm   718 STLLIKLESTGTHFVRCIKPNNQMIPFEFDGSAILSQLQCAGMTSVLKLMQDGFPSRTGFGDLYA 782

  Fly   712 MYKSVLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFVEFDRIMRSDPENMLAIV 776
            .|:..|||:|..|..|.||:.:|::|.|...||:||:||||||.|||.|||::|:.|||.|.:::
 Worm   783 CYQKKLPPKLSKLDPRMFCKCLFRALGLDQHDFQFGLTKVFFRAGKFAEFDQMMKQDPETMTSLI 847

  Fly   777 AKVKKWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHRPRYQGIGKINKI 841
            .||.:||:.:||.:|......||||:|:|.:|:..|...|.||||:|.|::...:.....|...:
 Worm   848 QKVNEWLVGARWKQSQYAVWSVIKLKNKIAWRSAQVTRLQSIARGYLTRQRFSRQIALYRKSVAL 912

  Fly   842 RTNTLKTIEIASGL-KMGREEIISGVNDIYRQIDDAIKKIKMNPRITQ--REMDSMYTVVMANMN 903
            ..|:.:..:|...| :..|.:..|..:...|.::..:..||:......  .:.::.|...:..::
 Worm   913 LKNSKEIEKILFRLNEHSRAKYTSSAHSTIRDLEKLVSHIKLTTSANDHFEKAENAYEHYVKRVD 977

  Fly   904 KLTVDLNTKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIE-NKRLKAEMETRRKAAE 967
            .:..|    ||:||:::         |..|.||..:|:|| ::|.||| .|..:.:.|.:||..|
 Worm   978 SMIAD----LKKQQKSD---------ELAEIERKRRESEE-KERLEIEAKKEAERQREIKRKLEE 1028

  Fly   968 AQRLRQEEEDRRAALALQEQLEKEAKDDAKYRQQLEQERRDHELALRLANESNG--------QVE 1024
            .|:..|:|.:.    .|..::.|.|::..|.||..|:|:.|..::.||| |::|        ::|
 Worm  1029 QQQNAQKEHEN----YLISEIHKAAEETEKKRQNEEKEKLDKMVSNRLA-EADGVALISSKMEIE 1088

  Fly  1025 DS--PPVIRNGVNDASPMGPNKLISFSQVVSNIASRYLNKSENVRAQQQALGKQKYDLSKWKYSE 1087
            .|  ....|:|                                           |||:....::.
 Worm  1089 PSSGSATFRDG-------------------------------------------KYDVGGCSFAY 1110

  Fly  1088 LRDAINTSCDIELLEACRQEFHRRLKVYHAWKAKNRKRTTMDENERAP-RSVMEAAFKQPPLVQP 1151
            |||.||||.||.||:||.:||.|||::|:.||::|     ....:|.| |:.:....::..:::.
 Worm  1111 LRDTINTSMDINLLKACEEEFRRRLRIYNEWKSRN-----APVQDRPPARAALSTVCEELSIMRS 1170

  Fly  1152 IQEIVTAQ-HRYFRIPFMRAN------------APDNTKRGLWYAHFDGQWIARQMELHADKPPI 1203
            |......| .|||:..|...|            ..|..:..:|:.||.||.|.||:...:.:||.
 Worm  1171 IATPSAPQIQRYFKCEFKENNQKGTCSWGSSIKCEDLDQVSMWFVHFSGQQIQRQLTFTSSRPPQ 1235

  Fly  1204 LLVAGTDDMQMCELSLEETGLTRKRGAEILEHEFNREWE 1242
            .|:||.||.|||.|:|:||.|..||||||.|.||...|:
 Worm  1236 TLIAGRDDAQMCTLALQETLLVGKRGAEISEDEFESHWK 1274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..45 CDD:280832 11/36 (31%)
Myosin_head 59..754 CDD:278492 378/705 (54%)
MYSc_Myo6 71..754 CDD:276833 369/692 (53%)
RILP-like <968..1015 CDD:304877 12/46 (26%)
Myosin-VI_CBD 1160..1246 CDD:293129 39/95 (41%)
hum-8NP_001294574.1 MYSc_Myo6 143..825 CDD:276833 369/692 (53%)
DUF5401 <882..>1071 CDD:375164 51/206 (25%)
tolA_full 983..>1076 CDD:274303 36/107 (34%)
Myosin-VI_CBD 1180..1274 CDD:374599 38/93 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 784 1.000 Domainoid score I29
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56417
Inparanoid 1 1.050 1071 1.000 Inparanoid score I127
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59165
OrthoDB 1 1.010 - - D112896at33208
OrthoFinder 1 1.000 - - FOG0005395
OrthoInspector 1 1.000 - - otm14495
orthoMCL 1 0.900 - - OOG6_105053
Panther 1 1.100 - - LDO PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3827
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.980

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