DRSC/TRiP Functional Genomics Resources

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Protein Alignment jar and LOC1278822

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_061507801.1 Gene:LOC1278822 / 1278822 VectorBaseID:AGAMI1_005641 Length:3010 Species:Anopheles gambiae


Alignment Length:1440 Identity:347/1440 - (24%)
Similarity:522/1440 - (36%) Gaps:514/1440 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QDHDDNCELMLLNEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLG 121
            :::.|.|:|..|||||.|:||:.|:....|||||.:|||||||:: ...:|.|..::.|..:.:|
Mosquito   166 REYPDLCQLPDLNEATLLENLRQRFEAGHIYTYVGSILIAVNPFK-FHPIYNPKYVRLYQNQRIG 229

  Fly   122 E-LPPHVFAIADKAIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCY-----SHDSAGPIET 180
            . ||||:|||||.|..:|...|.:|.|::|||||:||||||.:||.:|..     :|.|.  :|.
Mosquito   230 PILPPHIFAIADNAYYNMLKEKRNQCIVISGESGSGKTESTNFLLHHLTALSQKGAHGSG--VEQ 292

  Fly   181 KILDANPVLEAFGNAKTTRNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNY 245
            .||.|.|||||||||||..|||||||||||:|:|.....|.|..:..||||||||.:|...||||
Mosquito   293 TILSAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYRENGMVQGAVVQKYLLEKSRIVSQGHYERNY 357

  Fly   246 HVFYMLLAGAPQQLRDKLSLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPII 310
            ||||.||:||....||.|.|...:.|.||        |||...|       :|           .
Mosquito   358 HVFYYLLSGATDAERDALHLLPAEKYHYL--------NAKNLTL-------EN-----------C 396

  Fly   311 DDYQHFHNLDKALGRLGLSDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTIT 375
            |:...|..|.:::..:|.|..::..::::::|||.|||:.|............|...:...:.:.
Mosquito   397 DEKYEFSRLKQSMEMVGFSAEKQRRLFNVLSAVLLLGNVEFFPKKSTYHHDESVQVRNPDVVGLI 461

  Fly   376 SGLLGVDQTELRTALVSRVMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLIN 440
            |.||.|.|..|.:||.|:.:::.|    .|:|| ..|:.||..|||||||.:|..|||.||..:|
Mosquito   462 SELLRVKQETLMSALTSKRVKASG----ETLIM-QYKLPEAIAARDALAKCLYGALFDWIVLQVN 521

  Fly   441 QSI----PFQASNFYIGVLDIAGFEYF-TVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREG 500
            .::    ....:...||||||.|||.| ..|||||.||||.||.||.:||.::.|.||:.|||||
Mosquito   522 HALLNKDQVLHTGHSIGVLDIFGFEDFGPQNSFEQLCINYANEHLQYYFNLHVFKYEQKEYKREG 586

  Fly   501 LNVPEITFTDNQDIIELIEAKSNGIFTLLDEESKLPKPSYSHFTAE---VHKSWANHYRLGLPRS 562
            :...:|.|.||...::|.|:|.:|:..:||:....|..:......:   |||..|.:        
Mosquito   587 IKWTDIEFLDNYGCLQLFESKPSGLLCILDDLCNFPGATNETLLQKFNSVHKDNAFY-------- 643

  Fly   563 SRLKAHRTLRDEEGFLVRHFAGAVCYNTEQFIEKNNDALHASLEGLVQECD----------NP-- 615
                 .:..|.|..|:::|:||.|.|...:..|||.|.:...:..:::...          :|  
Mosquito   644 -----EKPQRKENAFIIKHYAGKVKYQVAEMREKNLDLMRQDIVSVLKNSSMAFVRELVGADPVA 703

  Fly   616 -----LLQTLF---------------------------------PSGSSTS-------------- 628
                 :|:..|                                 |:.|..|              
Mosquito   704 VFRWAILRAFFRGYFAFRSAGIKHRKERADMSYNKLATKTRYRAPNDSIVSHLVTVSSVNLTINR 768

  Fly   629 ----------VR----------------------------------------------------- 630
                      ||                                                     
Mosquito   769 IAKLFCARRPVRDAGMLDRYRNYSTKSATAKGGQRERRKNWPKRISNAMSDITSGHSNNQACSPN 833

  Fly   631 ----------------------------------------------GKLNF-------------- 635
                                                          ||||:              
Mosquito   834 SNLAYHRQSLGNAGYGAAGAASPGATGGTPRRSWSSFAFNNKNFPDGKLNYECNQQQDQTPQYHS 898

  Fly   636 ----------------------------------------------------------------- 635
                                                                             
Mosquito   899 KHLQSTAASSSSIYGSGGGGKSSANANSSASGAPNSGGVTGTGSGKGYGLGSAAARNRFERSGQD 963

  Fly   636 -----------------------------------------------------ISVGSKFKTQLG 647
                                                                 ::|.::|:..|.
Mosquito   964 VMARASQIVMKNKSFRPRERPKKGLKNLQSVKTLSAGQNLSNQTSAIKTRKQPLTVTAQFQNSLI 1028

  Fly   648 ELMEKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADLYSM 712
            .|||.|.|....||||||.|...|..||:.:....||:.:|.:..:.:...||..|:.:.:...:
Mosquito  1029 ALMETLNQANPFFIRCIKSNPNKIPNQFDDATVTRQLRYTGMLETVRIRRAGYNVRLTYEEFIQL 1093

  Fly   713 YKSVLPPELVS--LPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFVEFDRIMRSDPENMLAI 775
            |:.:||..|||  ...|.|...|    :|:.:.::.|:||::.|..:.:..|          :::
Mosquito  1094 YRILLPKGLVSSQKDVRDFMSTM----DLNKQHYQLGLTKIYMRESQKMRLD----------ISL 1144

  Fly   776 VAKVKKWLI-RSRWVKSAL---------GALCVI-------------KLRNRIIYRNKCVLIAQR 817
            ..|:...:| ..||.::.|         .|.|.|             |...:|  ||....:.|.
Mosquito  1145 HTKIIDSIICIQRWFRAILQRKKYCQYRNAACTIQSYWRDYLREKQEKFTRKI--RNHAATVIQA 1207

  Fly   818 IARGFLARK-------------------QHRPRYQGI--GKINKIRTNTLKTIEI---------- 851
            ..||:..||                   |.|.|::.:  .|:.:.|.....|..:          
Mosquito  1208 TWRGYTVRKWYSKLKTGVLIIQARIRGNQARSRFKELLSKKLQRERAKLRSTQSLPVERPIGTTA 1272

  Fly   852 ASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMYTVVMANM-----NKLTVDLNT 911
            |.|...|......|....|.:|..||:..|.......|..::...:|..|.     :.::.|...
Mosquito  1273 AGGSYGGGGGGAGGGGSTYPEIVHAIEHRKKPIPAVGRSFETAIDIVNKNRALFADDSMSADFID 1337

  Fly   912 KLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEE 976
            ..:::::.||:|.....|..:.|....:|.:|:...|..|:..|..:             .|...
Mosquito  1338 DDEDEEEEEEEETTGSRQATITATCGEEEEDEEDDEEGYEDLGLVDD-------------PQYMA 1389

  Fly   977 DRRAAL------------------ALQEQLEKEAKDDAKYRQQLEQERRDHELALRLANESNGQV 1023
            :.|:||                  ||.::.||..|                .|.:..........
Mosquito  1390 NNRSALMHPVKTAAPVTTSPTVNSALLDRNEKYIK----------------SLVISGGGGGGATA 1438

  Fly  1024 EDSPPVIRNGVNDASPMGPNKLISFSQVVSNIASRY----LNKSENVRAQQ------QALGKQKY 1078
            ..||.....|..:||.:|           |:::..|    |.:.|:|..:.      :...|..:
Mosquito  1439 SSSPSAGGGGGGNASSVG-----------SSVSGAYQKAPLQRQEDVLDRPLRMYDIERASKSTF 1492

  Fly  1079 D---LSKWKY 1085
            |   |:|::|
Mosquito  1493 DDTELAKYRY 1502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670
MYSc_Myo6 71..754 CDD:276833 267/1003 (27%)
CBD_MYO6-like 765..913 CDD:409646 36/206 (17%)
ERM_helical <954..1020 CDD:466641 11/83 (13%)
MYO6_MIU_linker 1002..1093 CDD:480843 17/97 (18%)
MyUb_Myo6 1076..1116 CDD:439319 4/13 (31%)
Myosin-VI_CBD 1160..1246 CDD:465157
LOC1278822XP_061507801.1 None
Blue background indicates that the domain is not in the aligned region.

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