DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jar and jar

DIOPT Version :10

Sequence 1:NP_001014650.2 Gene:jar / 42889 FlyBaseID:FBgn0011225 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_061517154.1 Gene:jar / 1272367 VectorBaseID:AGAMI1_003334 Length:1259 Species:Anopheles gambiae


Alignment Length:1273 Identity:906/1273 - (71%)
Similarity:1046/1273 - (82%) Gaps:36/1273 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DTQLVWVRDAAEGYIQGRITEIGAKEFEVTPTDRKYPKRTCHFDDIHSSCDGPQDHDDNCELMLL 68
            |:||||.||..:||||||||||||.|::|.|.|.|.|||:|..:||..||:.|.|:|||||||.|
Mosquito     3 DSQLVWARDIQDGYIQGRITEIGASEYDVQPVDSKLPKRSCIPEDIFPSCERPSDNDDNCELMFL 67

  Fly    69 NEATFLDNLKTRYYKDKIYTYVANILIAVNPYREIKELYAPDTIKKYNGRSLGELPPHVFAIADK 133
            ||||.|||::.|||||||||||||||||||||:||.:||:..|:|:|:|:|:|||||||:|||||
Mosquito    68 NEATLLDNIRNRYYKDKIYTYVANILIAVNPYKEIPDLYSTATLKRYSGKSIGELPPHVYAIADK 132

  Fly   134 AIRDMRVYKLSQSIIVSGESGAGKTESTKYLLKYLCYSHDSAGPIETKILDANPVLEAFGNAKTT 198
            |||||||.|:|||||||||||||||||||||||:||.|..:|||||.|||||||:||||||||||
Mosquito   133 AIRDMRVLKMSQSIIVSGESGAGKTESTKYLLKFLCDSVAAAGPIEQKILDANPILEAFGNAKTT 197

  Fly   199 RNNNSSRFGKFIEVHYDAKCQVVGGYISHYLLEKSRICTQSAEERNYHVFYMLLAGAPQQLRDKL 263
            |||||||||||||||||.:||||||:|||||||||||||||.:||||||||:|.||||..||::|
Mosquito   198 RNNNSSRFGKFIEVHYDKRCQVVGGHISHYLLEKSRICTQSPDERNYHVFYLLCAGAPPALRERL 262

  Fly   264 SLGKPDDYRYLSGCTQYFANAKTEQLIPGSQKSKNHQQKGPLKDPIIDDYQHFHNLDKALGRLGL 328
            :|.||||||||.||||||.:..||..||...||:.|..||||||||:|||:.|..||:|||||||
Mosquito   263 ALTKPDDYRYLCGCTQYFTHPHTESRIPAGHKSRVHAAKGPLKDPILDDYEDFRQLDEALGRLGL 327

  Fly   329 SDTEKLGIYSLVAAVLHLGNIAFEEIPDDVRGGCQVSEASEQSLTITSGLLGVDQTELRTALVSR 393
            |:.|:..||||||||||||||.|||.|:|..|||::::.|:.||.:|:.|:|||.:|||.||:||
Mosquito   328 SEAERTQIYSLVAAVLHLGNIRFEENPEDSNGGCRITQESQPSLNVTARLIGVDPSELRQALMSR 392

  Fly   394 VMQSKGGGFKGTVIMVPLKIYEASNARDALAKAIYSRLFDRIVGLINQSIPFQASNFYIGVLDIA 458
            ||:|||||.|||||||.||:|||:|||||||||:||:|||.||.||||:||||||::||||||||
Mosquito   393 VMKSKGGGIKGTVIMVMLKVYEANNARDALAKALYSKLFDHIVSLINQNIPFQASSYYIGVLDIA 457

  Fly   459 GFEYFTVNSFEQFCINYCNEKLQKFFNDNILKNEQELYKREGLNVPEITFTDNQDIIELIEAKSN 523
            ||||||||||||||||||||||||||:||||..||.||.|||||||||.:|||||||||||:|||
Mosquito   458 GFEYFTVNSFEQFCINYCNEKLQKFFDDNILAAEQVLYAREGLNVPEIKYTDNQDIIELIESKSN 522

  Fly   524 GIFTLLDEESKLPKPSYSHFTAEVHKSWANHYRLGLPRSSRLKAHRTLRDEEGFLVRHFAGAVCY 588
            |||||||||||||:|||:|||.|||.:|..||||..||:|||||||:|||:||||||||||||||
Mosquito   523 GIFTLLDEESKLPRPSYAHFTNEVHSAWNGHYRLSFPRASRLKAHRSLRDDEGFLVRHFAGAVCY 587

  Fly   589 NTEQFIEKNNDALHASLEGLVQECDNPLLQTLFP---SGSSTSVRGKLNFISVGSKFKTQLGELM 650
            ||.||||||||||||||||||||.:|.||..||.   :|.|....|||:||||||||::|||||:
Mosquito   588 NTNQFIEKNNDALHASLEGLVQESENALLNALFSGGGAGKSPMNVGKLSFISVGSKFRSQLGELL 652

  Fly   651 EKLEQNGTNFIRCIKPNSKMIDRQFEGSLALAQLKCSGTISVLELMEHGYPSRVLFADLYSMYKS 715
            |||..|||||||||||||:|||.:|||||||||||.|||.|||||||:||||||.|.:||:||||
Mosquito   653 EKLRNNGTNFIRCIKPNSRMIDHEFEGSLALAQLKYSGTNSVLELMEYGYPSRVPFNELYNMYKS 717

  Fly   716 VLPPELVSLPARTFCEAMFQSLNLSAKDFKFGITKVFFRPGKFVEFDRIMRSDPENMLAIVAKVK 780
            .|||||..|..|||||||..||.|::.:||||||||||||||||||||||||||||:.|||||||
Mosquito   718 YLPPELARLAPRTFCEAMLMSLKLNSNEFKFGITKVFFRPGKFVEFDRIMRSDPENLQAIVAKVK 782

  Fly   781 KWLIRSRWVKSALGALCVIKLRNRIIYRNKCVLIAQRIARGFLARKQHRPRYQGIGKINKIRTNT 845
            ||||||||:|||..|:|||||:||||:|||.|::.|:..||:|.||:|:|||:||.||..:..|.
Mosquito   783 KWLIRSRWIKSAFAAICVIKLKNRIIFRNKSVVLLQKTIRGYLVRKKHQPRYRGIAKIKAVEDNL 847

  Fly   846 LKTIEIASGLKMGREEIISGVNDIYRQIDDAIKKIKMNPRITQREMDSMYTVVMANMNKLTVDLN 910
            .|...||..||..|:::.:.:.|:...:..|:.||:.||.|....:|..|..:|.:::.....:|
Mosquito   848 RKMHAIAEQLKADRDKMQANIRDVQASLTAAVAKIRANPSIGAAAIDQQYADIMRSIDTNMKLIN 912

  Fly   911 TKLKEQQQAEEQERLRKIQEALEAERAAKEAEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEE 975
            .:|:||:.|||||||.||:.||||||.|||.||:|.|||.||::.|.|:|.|||..||:|||||.
Mosquito   913 ARLQEQRNAEEQERLNKIKLALEAERRAKEEEERRLREEEENRKRKTEIEARRKEEEAKRLRQEG 977

  Fly   976 EDRRAALALQEQLEKEAKDDAKYRQQLEQERRDHELALRLANESNGQVEDSPPVIRNGVNDASPM 1040
            |||:||||||.||||||::|.:|||||||||||||||||||.|||||||||||.:|||..:.:|:
Mosquito   978 EDRKAALALQAQLEKEAQEDIQYRQQLEQERRDHELALRLAQESNGQVEDSPPALRNGTPEVTPL 1042

  Fly  1041 G-PNKLISFSQVVSNIASRYLNKSENVRAQQQALGKQKYDLSKWKYSELRDAINTSCDIELLEAC 1104
            | .|:||               :||.:|||||.:.|||:||||||||||||||||||||||||||
Mosquito  1043 GNANRLI---------------RSEAIRAQQQLVEKQKHDLSKWKYSELRDAINTSCDIELLEAC 1092

  Fly  1105 RQEFHRRLKVYHAWKAKNRKRTTMDENERAPRSVMEAAFKQPPLVQPIQEIVT--AQHRYFRIPF 1167
            |.||||||||||||||||||||||||||||||||||||.:.||.:.|.||||.  :.||||||||
Mosquito  1093 RHEFHRRLKVYHAWKAKNRKRTTMDENERAPRSVMEAAARSPPRLTPKQEIVPTGSVHRYFRIPF 1157

  Fly  1168 MR--------------ANAPDNTKRGLWYAHFDGQWIARQMELHADKPPILLVAGTDDMQMCELS 1218
            :|              ||| |::||..|:||||||::|||||||.||||||||||.|||||||||
Mosquito  1158 VRPSNGGGPAEIGTAAANA-DDSKRSWWFAHFDGQYVARQMELHTDKPPILLVAGKDDMQMCELS 1221

  Fly  1219 LEETGLTRKRGAEILEHEFNREWERNGGKAYKNLGAAK 1256
            ||||.|||||||||||||||||||::|||.|..|.|.|
Mosquito  1222 LEETALTRKRGAEILEHEFNREWEQHGGKPYNRLSARK 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jarNP_001014650.2 Myosin_N 7..49 CDD:460670 26/41 (63%)
MYSc_Myo6 71..754 CDD:276833 525/685 (77%)
CBD_MYO6-like 765..913 CDD:409646 71/147 (48%)
ERM_helical <954..1020 CDD:466641 49/65 (75%)
MYO6_MIU_linker 1002..1093 CDD:480843 57/91 (63%)
MyUb_Myo6 1076..1116 CDD:439319 37/39 (95%)
Myosin-VI_CBD 1160..1246 CDD:465157 71/99 (72%)
jarXP_061517154.1 None

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