DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta-PheRS and Lrrc47

DIOPT Version :9

Sequence 1:NP_651237.1 Gene:beta-PheRS / 42888 FlyBaseID:FBgn0039175 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_957678.1 Gene:Lrrc47 / 72946 MGIID:1920196 Length:581 Species:Mus musculus


Alignment Length:296 Identity:78/296 - (26%)
Similarity:128/296 - (43%) Gaps:52/296 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LKIDPSTAQIRPYAVAAVLRNVTFTQA-SYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPF 171
            :::.|....:|||.|.|::|.:..... :...|::.|.|||.::|.|||...|.||||..::||.
Mouse   322 VRVSPEVKDVRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPL 386

  Fly   172 SYEALAPDQIKFKPLNQTKEMTGSELMDFYSTHAQ-------------LKQYLPIIRESPVYPVI 223
            .|.|..|:.:|..||.: ||....||:......|:             |.:||.::.....||.:
Mouse   387 LYAARPPEDLKIVPLGR-KEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGKENYPCL 450

  Fly   224 YDANRVVLSLPPIINGDHSKITLKTKNVFIECT-ATDRTKAKVVLDTIVCLFSEHCAQKFTVEPC 287
            .||...|:|.|||.|.:.:||...|.|:|:|.| ||.....|.::|:::...:|  ..|.|.|  
Mouse   451 VDAEGDVISFPPITNSEKTKIKKTTCNLFLEVTSATSLQLCKDIMDSLILRMAE--LSKSTSE-- 511

  Fly   288 DVVQPDGSVISYPELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGD-SLVVKIPP 351
                           ...|:.:|...|:|..|:.:|         .:.|.:..||. .|||    
Mouse   512 ---------------NKEEDMLSGTEADAGCGLSDP---------NLTLSSGKDGQCPLVV---- 548

  Fly   352 TRHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAK 387
               :.:...|:...:.:.|.......:||..:.:.:
Mouse   549 ---EQVRVVDLEGSLKVVYPSKTDLITLPPHVTVVR 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta-PheRSNP_651237.1 PLN02265 1..589 CDD:215149 78/296 (26%)
B3_4 118..279 CDD:214876 58/175 (33%)
B5 310..372 CDD:281482 13/62 (21%)
PheRS_beta_core 390..588 CDD:238392
Lrrc47NP_957678.1 LRR_RI 34..260 CDD:238064
leucine-rich repeat 54..78 CDD:275380
LRR_8 77..143 CDD:290566
LRR 1 78..97
leucine-rich repeat 79..102 CDD:275380
LRR 2 102..123
leucine-rich repeat 103..132 CDD:275380
LRR 3 132..154
leucine-rich repeat 133..156 CDD:275380
LRR_8 155..239 CDD:290566
LRR 4 156..177
leucine-rich repeat 157..182 CDD:275380
LRR 5 182..204
leucine-rich repeat 183..205 CDD:275380
LRR 6 205..227
leucine-rich repeat 206..228 CDD:275380
LRR 7 228..248
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..301
B3_4 332..504 CDD:214876 57/172 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D431403at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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