DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta-PheRS and farsb

DIOPT Version :10

Sequence 1:NP_651237.1 Gene:beta-PheRS / 42888 FlyBaseID:FBgn0039175 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_001007769.1 Gene:farsb / 493608 ZFINID:ZDB-GENE-021206-2 Length:590 Species:Danio rerio


Alignment Length:595 Identity:372/595 - (62%)
Similarity:461/595 - (77%) Gaps:11/595 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPTIGVKRDLLFEALGKTYTDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYR 65
            |||:.|||||||||||:||||:||.:|||.|||||||:|:||.::::|||| ..|..||:.::|:
Zfish     1 MPTVSVKRDLLFEALGQTYTDEEFDELCFEFGLELDEITSEKDIISREQGD-DKAEGASDVVLYK 64

  Fly    66 IDIPANRYDLLCLEGLVTGLLVFQGKLKPPKFQFVELA---KRQVLKIDPSTAQIRPYAVAAVLR 127
            ||:||||||||||||||.||.||:.|::.|:::.|..|   :.|.|.|...||.:||:|||||||
Zfish    65 IDVPANRYDLLCLEGLVRGLQVFKDKMEAPRYKRVSPADGGEPQRLLITEETASVRPFAVAAVLR 129

  Fly   128 NVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEM 192
            |:||||..|:|||:||:||||||||||||||||||||||:.|||:|.|.||.:|:||||||::|.
Zfish   130 NITFTQERYDSFIELQEKLHQNICRKRTLVAIGTHDLDTISGPFTYTAKAPGEIRFKPLNQSQEF 194

  Fly   193 TGSELMDFYSTHAQLKQYLPIIRESPVYPVIYDANRVVLSLPPIINGDHSKITLKTKNVFIECTA 257
            |.:|||..|.:.:.|:.||.||...|:||:|||:|.:|||:||||||:||||:|.||||||||||
Zfish   195 TATELMSLYKSDSHLRHYLHIIENEPLYPIIYDSNGIVLSMPPIINGNHSKISLNTKNVFIECTA 259

  Fly   258 TDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGSVISYPELEVREERISVKRANAYIGIDE 322
            ||.||||:.||.||.:|||:|.|.||||..:||.|||.:..||||..|.|.:|.:..|..:||:|
Zfish   260 TDLTKAKITLDMIVTMFSEYCEQPFTVEEAEVVYPDGRMCVYPELAYRTETLSGEFINKKVGINE 324

  Fly   323 PAEKLADMLTRMYLEAKVDGD--SLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQI 385
            .||.:|.:||||.|.::|.|:  .:.|:|||||.||||||||.||.|||||:|||.:|.|....:
Zfish   325 SAESIAQLLTRMCLRSEVSGEDGQIQVEIPPTRSDVIHACDIMEDAAIAYGFNNIVRSTPRTYTV 389

  Fly   386 AKQFPLNKLTEQLREQVAQAGFTEALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRT 450
            |.|.|:|||||.||:.:|.|||||||||.|||::||..||.||:..:.||||.||||.||||.||
Zfish   390 ANQLPVNKLTELLRQDLAAAGFTEALTFALCSQEDIADKLRKNMAEIGAVHISNPKTAEFQVART 454

  Fly   451 TLLPGLLKTLVANRKMPLPLKLFEISDVVVADESTEVGARNERRVCAVNCNKTAGFEVVHGLLDR 515
            .||||||||:.||||||||||||||||||:.||:.:|||||.||:||:..||:.||||:||||||
Zfish   455 CLLPGLLKTVAANRKMPLPLKLFEISDVVLKDETKDVGARNNRRLCAIYYNKSPGFEVIHGLLDR 519

  Fly   516 VMQLLSV-PWKSASGTKGYYLQATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCS 579
            |||||.| |.:.    .||::||.||.::||||||.:...|..||.:|||||.|:..||||.|||
Zfish   520 VMQLLDVKPGRD----HGYHIQAAEDSTFFPGRCAEIFSSGKSIGHLGVLHPDVISRFELTMPCS 580

  Fly   580 AVEFTIEPFV 589
            |:|..||||:
Zfish   581 AIEIDIEPFL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta-PheRSNP_651237.1 PLN02265 1..589 CDD:215149 371/593 (63%)
farsbNP_001007769.1 PLN02265 1..590 CDD:215149 371/593 (63%)

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