DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta-PheRS and Y54E10A.6

DIOPT Version :9

Sequence 1:NP_651237.1 Gene:beta-PheRS / 42888 FlyBaseID:FBgn0039175 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_001380012.1 Gene:Y54E10A.6 / 171890 WormBaseID:WBGene00021828 Length:507 Species:Caenorhabditis elegans


Alignment Length:206 Identity:70/206 - (33%)
Similarity:112/206 - (54%) Gaps:17/206 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PSTAQIRPYAVAAVLRNVTFTQA-SYNSFIDLQDKLHQN-ICRKRTLVAIGTHDLDTLQGPFSYE 174
            ||.::||||.|..|:.||..... |:..||.||.|:|.: :|..|||.|||||.||:.|.|..|.
 Worm   291 PSVSEIRPYLVCCVINNVDLNGGDSFKKFIALQTKMHASALCENRTLSAIGTHRLDSFQLPLCYM 355

  Fly   175 ALAPDQIKFKPLNQTKEMTGSELMDFY-------------STHAQLKQYLPIIRESPVYPVIYDA 226
            ||..|::..:.||:...::.|||:|..             ||...|.:||.|:::..:...:.|:
 Worm   356 ALPKDELYIRALNKKSSVSASELLDSLLRDAELARKRSKRSTVDPLHKYLHIVKDENILACLVDS 420

  Fly   227 NRVVLSLPPIINGDHSKITLKTKNVFIECTATDRTKA-KVVLDTIVCLFSEHCAQKFTVEPCDVV 290
            .::|:|||||.|.|.:|:|:.|.::::|.::....:| |..:|.:: |.|.......:::...||
 Worm   421 QQIVISLPPITNSDCTKLTVDTTSIWVEVSSKQSLEACKKTMDELI-LSSRQIFPTLSIDQVRVV 484

  Fly   291 QPDGSVISYPE 301
            ..|..|..||:
 Worm   485 DSDTLVSIYPD 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta-PheRSNP_651237.1 PLN02265 1..589 CDD:215149 70/206 (34%)
B3_4 118..279 CDD:214876 61/176 (35%)
B5 310..372 CDD:281482
PheRS_beta_core 390..588 CDD:238392
Y54E10A.6NP_001380012.1 LRR <45..>219 CDD:227223
leucine-rich repeat 47..69 CDD:275380
leucine-rich repeat 70..92 CDD:275380
leucine-rich repeat 93..115 CDD:275380
leucine-rich repeat 116..139 CDD:275380
leucine-rich repeat 140..164 CDD:275380
leucine-rich repeat 166..188 CDD:275380
leucine-rich repeat 189..211 CDD:275380
PLN02265 266..>495 CDD:215149 69/204 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D431403at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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