DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta-PheRS and FARSB

DIOPT Version :9

Sequence 1:NP_651237.1 Gene:beta-PheRS / 42888 FlyBaseID:FBgn0039175 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_005678.3 Gene:FARSB / 10056 HGNCID:17800 Length:589 Species:Homo sapiens


Alignment Length:592 Identity:369/592 - (62%)
Similarity:457/592 - (77%) Gaps:6/592 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPTIGVKRDLLFEALGKTYTDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYR 65
            |||:.|||||||:|||:||||:||.:|||.|||||||:|:||::::||||:| .||.||:.::|:
Human     1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNV-KAAGASDVVLYK 64

  Fly    66 IDIPANRYDLLCLEGLVTGLLVFQGKLKPPKFQFV-ELAKRQVLKIDPSTAQIRPYAVAAVLRNV 129
            ||:||||||||||||||.||.||:.::|.|.::.| ...|.|.|.|...||:|||:||||||||:
Human    65 IDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNI 129

  Fly   130 TFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTG 194
            .||:..|:|||:||:||||||||||.||||||||||||.|||:|.|..|..|||||||:|||.|.
Human   130 KFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTA 194

  Fly   195 SELMDFYSTHAQLKQYLPIIRESPVYPVIYDANRVVLSLPPIINGDHSKITLKTKNVFIECTATD 259
            .|||:.|.|...||.||.||...|:||||||:|.||||:|||||||||:||:.|:|:|||||.||
Human   195 CELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTD 259

  Fly   260 RTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGSVISYPELEVREERISVKRANAYIGIDEPA 324
            .||||:|||.||.:|||:|..:||||..:||.|:|...::|||..|:|.:.....|..:||.|..
Human   260 FTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETP 324

  Fly   325 EKLADMLTRMYLEAKV--DGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAK 387
            |.||.:||||||:::|  ||:.:.::|||||.|:||||||.||.|||||||||:.:||....||.
Human   325 ENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIAN 389

  Fly   388 QFPLNKLTEQLREQVAQAGFTEALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTL 452
            |||||||||.||..:|.|||||||||.|||::||..||..:|.|..||||.||||.||||.||||
Human   390 QFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTL 454

  Fly   453 LPGLLKTLVANRKMPLPLKLFEISDVVVADESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVM 517
            |||||||:.||||||||||||||||:|:.|.:|:|||:|.|.:|||..||..|||::||||||:|
Human   455 LPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIM 519

  Fly   518 QLLSVPWKSASGTKGYYLQATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCSAVE 582
            |||.||.....|  ||.::|:|.|::||||||.:...|..:||:|||||.|:..||||.|||::|
Human   520 QLLDVPPGEDKG--GYVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLE 582

  Fly   583 FTIEPFV 589
            ..:.||:
Human   583 INVGPFL 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta-PheRSNP_651237.1 PLN02265 1..589 CDD:215149 368/590 (62%)
B3_4 118..279 CDD:214876 112/160 (70%)
B5 310..372 CDD:281482 34/63 (54%)
PheRS_beta_core 390..588 CDD:238392 124/197 (63%)
FARSBNP_005678.3 PLN02265 1..589 CDD:215149 368/590 (62%)
B3_4 118..279 CDD:214876 112/160 (70%)
B5 310..374 CDD:281482 34/63 (54%)
PheRS_beta_core 392..588 CDD:238392 124/197 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158770
Domainoid 1 1.000 265 1.000 Domainoid score I1918
eggNOG 1 0.900 - - E1_COG0072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4160
Inparanoid 1 1.050 740 1.000 Inparanoid score I593
Isobase 1 0.950 - 0 Normalized mean entropy S494
OMA 1 1.010 - - QHG62210
OrthoDB 1 1.010 - - D378921at2759
OrthoFinder 1 1.000 - - FOG0004315
OrthoInspector 1 1.000 - - oto88624
orthoMCL 1 0.900 - - OOG6_101233
Panther 1 1.100 - - LDO PTHR10947
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1438
SonicParanoid 1 1.000 - - X3585
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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