DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13609 and MED25

DIOPT Version :10

Sequence 1:NP_651233.1 Gene:CG13609 / 42883 FlyBaseID:FBgn0039170 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_650854.1 Gene:MED25 / 42385 FlyBaseID:FBgn0038760 Length:863 Species:Drosophila melanogaster


Alignment Length:259 Identity:93/259 - (35%)
Similarity:141/259 - (54%) Gaps:41/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QKEPENPENGDS-------KETIWSGELEWEDAQILDQPKTLHTVQCKICSMVKEGQPEINTENW 88
            |..|:..:.|:|       :|.||:|.|||.:....||.|..||:||.:|:.:|:|:|||..|||
  Fly   503 QGNPQQQQQGNSQQEQASLREKIWTGVLEWSEKPKSDQQKIPHTLQCTVCTNIKDGEPEIKAENW 567

  Fly    89 PNKLKTQLIPKKVLGKIGEQFLKDARMVVFRSSQGEVLNLLITAMSSGFAGCIHF---PSNPNCN 150
            |.||..||:||.::|.||.|||||::|||||.:.||.|:.|...|:||:|||:||   |::|.|:
  Fly   568 PPKLLMQLMPKHLVGNIGGQFLKDSKMVVFRPTPGEALDSLAKMMTSGYAGCVHFSSIPNSPACD 632

  Fly   151 IKALILIYSRDHQALVGFIPNNEDSFSERLQEILQGAK--------------RKPGVKTPKQPQP 201
            :|.|||:|:.|..|.:||||||:..|.|||::::|..:              ::.| |:|.:.|.
  Fly   633 LKVLILLYTPDRNAFLGFIPNNQAMFVERLRKVIQQKQHGNMQQQQQQQQMMQQQG-KSPMELQQ 696

  Fly   202 EEPPPVEEDAIINELLWTGSLNWSTQASLEEPSISHKLECSVYIAIKNGDPGISAEDWPTDMPM 265
            ::....::.                |...:.....|..:..:.:.:..|.||......|..|||
  Fly   697 QQQQQQQQQ----------------QMQQDNSQQQHYNQFQLNMQMGGGGPGGGPGPGPGGMPM 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13609NP_651233.1 Med25 41..189 CDD:463243 77/171 (45%)
Med25 212..358 CDD:463243 9/54 (17%)
MED25NP_650854.1 Med25_VWA 5..218 CDD:463253
Med25 520..671 CDD:463243 76/150 (51%)
Blue background indicates that the domain is not in the aligned region.

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