DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spps and SWI5

DIOPT Version :9

Sequence 1:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_010430.1 Gene:SWI5 / 851724 SGDID:S000002553 Length:709 Species:Saccharomyces cerevisiae


Alignment Length:741 Identity:153/741 - (20%)
Similarity:270/741 - (36%) Gaps:186/741 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 VQQQAQGTNASGANGSGVTNSGTAGQLP----GSI---TIPGTNLQIPTSVAAANGLLG------ 246
            :|..:..:||.|::.|.....|....|.    |:|   ....||..|...:...|..||      
Yeast    20 LQTNSYYSNARGSDPSSYAIEGEYKTLATDDLGNILNLNYGETNEVIMNEINDLNLPLGPLSDEK 84

  Fly   247 --NISNISNLLGGG-QSIKLENGQLQMRPQLVQFPAPAMPQQQQTVAVQIPVQTANGQTIYQTVH 308
              .:|..|.|:|.. ||:   |..|:...:.|...|.::..:.:       :...:|.|:||   
Yeast    85 SVKVSTFSELIGNDWQSM---NFDLENNSREVTLNATSLLNENR-------LNQDSGMTVYQ--- 136

  Fly   309 VPVQAAATSSGGLQNLMQAQSLQMPSASQMQIIPQFSQIAQIVTPNGQIQQVQLAMPYPQLPPNA 373
               :..:......:.:..|.:| :.:.::.:|...|.:         .:.::.|           
Yeast   137 ---KTMSDKPHDEKKISMADNL-LSTINKSEINKGFDR---------NLGELLL----------- 177

  Fly   374 NIIHIQNPHQQQQQQVQQQQQQQQAQQQQQAQQQQAQQQQQQQVQAQHQQLLQAISDASAGGQ-L 437
                     ||||:..:|.:.||:|.::.:.:.:|.|.:|||         |||..:.|.|.| |
Yeast   178 ---------QQQQELREQLRAQQEANKKLELELKQTQYKQQQ---------LQATLENSDGPQFL 224

  Fly   438 PPNQPITITNAQGQQL---TVIPAQLRPNAPTAPTPAPAGVPTPMQMPNLQALPIQNIPGLGQVQ 499
            .|.:.|:..:...:.:   ::.|....|.:.|:.|.:|:      :..|.|...:|.....|.|.
Yeast   225 SPKRKISPASENVEDVYANSLSPMISPPMSNTSFTGSPS------RRNNRQKYCLQRKNSSGTVG 283

  Fly   500 IIHANQLPPNLPANFQQVLTQLPMSHPQVQTQGQVQVMPKQEPQSPTQMITSIKQEPPDTFGPIS 564
                       |..||::....   :..:.:..:::..|.:...|.|:.||        .|.|.|
Yeast   284 -----------PLCFQELNEGF---NDSLISPKKIRSNPNENLSSKTKFIT--------PFTPKS 326

  Fly   565 ATGNPPAPASTPNTA--SPQQQQIKF-LHTESNSLSSLSIPASIQITAL------PQQATNTPNT 620
            ...     ::|.|:|  :|...::.| ::.|.........|..:.|..|      |.::.:..:.
Yeast   327 RVS-----SATSNSANITPNNLRLDFKINVEDQESEYSEKPLGLGIELLGKPGPSPTKSVSLKSA 386

  Fly   621 PATTQP-IPVSLPARSKVNAVTTSSTQI-TIAPTGGQV--VSVTTQARGATASIRSTNTSTTTIT 681
            .....| ||.|:.....||.|:.||:.| ...|.|.|:  .|::..|.|       .|.:|..:.
Yeast   387 SVDIMPTIPGSVNNTPSVNKVSLSSSYIDQYTPRGKQLHFSSISENALG-------INAATPHLK 444

  Fly   682 TPSQ---------SHLNMNISVASVGGAATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKK 737
            .|||         :.|:.|:...:....    |......||:.|........|......|:..:.
Yeast   445 PPSQQARHREGVFNDLDPNVLTKNTDNE----GDDNEENEPESRFVISETPSPVLKSQSKYEGRS 505

  Fly   738 RQ---HI---------------------------------------CHITGCHKVYGKTSHLRAH 760
            .|   ||                                       |...||.|.:.:..::|:|
Yeast   506 PQFGTHIKEINTYTTNSPSKITRKLTTLPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSH 570

  Fly   761 LRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKS 825
            ::.|..:||:.|....|.|.|.|:.:|.||:::|. ||.:.| .|.|||.|.|.|..| ::....
Yeast   571 IQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ-EKAYAC-PCGKKFNREDALVVH-RSRMIC 632

  Fly   826 RSGVELIELSIKQETKGGNAPKSIST 851
            ..|.:...:.||:..:....|:...|
Yeast   633 SGGKKYENVVIKRSPRKRGRPRKDGT 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 34/143 (24%)
C2H2 Zn finger 742..764 CDD:275368 6/21 (29%)
zf-H2C2_2 756..783 CDD:290200 9/26 (35%)
C2H2 Zn finger 772..794 CDD:275368 8/21 (38%)
zf-H2C2_2 786..809 CDD:290200 9/22 (41%)
zf-C2H2 800..822 CDD:278523 9/21 (43%)
C2H2 Zn finger 802..822 CDD:275368 9/19 (47%)
SWI5NP_010430.1 COG5048 124..630 CDD:227381 123/604 (20%)
C2H2 Zn finger 552..574 CDD:275368 6/21 (29%)
C2H2 Zn finger 582..604 CDD:275368 8/21 (38%)
C2H2 Zn finger 611..627 CDD:275368 9/17 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6780
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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